y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00041955m |
Family | GH17 |
Protein Properties | Length: 372 Molecular Weight: 40652.5 Isoelectric Point: 5.7887 |
Chromosome | Chromosome/Scaffold: 017022 Start: 1633 End: 4007 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 29 | 345 | 0 |
IGINYGQIADNLPSPARVSWLLRSMQVSKVKLYDADPYVLSAFLDTGVEFVVGIGNENVSAMVDPAAARAWIQRHVQPYLPATRITCITVGNEVFKGNDT ELKANLLPAMQSVYQALAALGLQGTVNVTTAHSLDIMGSSFPPSAGAFRADVAPYLQPILSFLSMARSPFLINCYPYFAYKADPGNVPLEYVLFQPNAGV TDTNTRLNYNNMLYAQVDSVYAAIQALGHADIDVKVSETGWPSRGDPDEAGATPEYAGTYIGNLLRRIEMKQGTPLRPSVPIDVYVFALFNENLKPGPAS ERNYGLFYPDGTPVYNV |
Full Sequence |
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Protein Sequence Length: 372 Download |
MAERFEARWL PFRFVLAVVL LVLTTATPIG INYGQIADNL PSPARVSWLL RSMQVSKVKL 60 YDADPYVLSA FLDTGVEFVV GIGNENVSAM VDPAAARAWI QRHVQPYLPA TRITCITVGN 120 EVFKGNDTEL KANLLPAMQS VYQALAALGL QGTVNVTTAH SLDIMGSSFP PSAGAFRADV 180 APYLQPILSF LSMARSPFLI NCYPYFAYKA DPGNVPLEYV LFQPNAGVTD TNTRLNYNNM 240 LYAQVDSVYA AIQALGHADI DVKVSETGWP SRGDPDEAGA TPEYAGTYIG NLLRRIEMKQ 300 GTPLRPSVPI DVYVFALFNE NLKPGPASER NYGLFYPDGT PVYNVGLRGY LPPMDYSQGT 360 RKVRSSPVFL C* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-6 | 56 | 338 | 293 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-101 | 29 | 345 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAD40655.2 | 0 | 12 | 363 | 20 | 376 | OSJNBa0073L04.8 [Oryza sativa (japonica cultivar-group)] |
EMBL | CAH67163.1 | 0 | 12 | 365 | 20 | 378 | H0717B12.10 [Oryza sativa (indica cultivar-group)] |
GenBank | EAZ30671.1 | 0 | 12 | 371 | 20 | 388 | hypothetical protein OsJ_14727 [Oryza sativa Japonica Group] |
RefSeq | NP_001052739.1 | 0 | 12 | 365 | 20 | 378 | Os04g0412300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002446413.1 | 0 | 1 | 362 | 3 | 389 | hypothetical protein SORBIDRAFT_06g015590 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 29 | 347 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 29 | 347 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 29 | 347 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 29 | 347 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 29 | 347 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |