Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00041981m |
Family | GT8 |
Protein Properties | Length: 396 Molecular Weight: 45229.2 Isoelectric Point: 10.0357 |
Chromosome | Chromosome/Scaffold: 0169446 Start: 1190 End: 2575 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 149 | 385 | 1.4013e-45 |
CLPLRLANEYFSLDPDRQQLPNQHKLTNPKLYHYALFSDNILATAVVVNSTVLNAKHPSDHVFHIVTDRLNYAPMRMWFLSNPPGKATIEVQNIGEFTWL NDSYSPVLKQLGSQSMIDYYFGTNRANPDSNLKYRNPKYLSILNHLRFYLPEIYPKLDKMVFLDDDIVVKKDLTGLWSINMKGKVNGAVETCGESFHRFD RYLNFSNPVIAKNFDPHACGWAFGMNVFDLAEWKRQT |
Full Sequence |
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Protein Sequence Length: 396 Download |
MPKHTSAKVV AENSLTARTD GKTKSFVLPD MRIRNIKDQL IKAKVYVGLG SIRANSQYLK 60 DLRQRIREVQ KVLGDASKDT DLPKNANEKV KALEQMLIKG RQMQDDCSIV VKKLRAMLHS 120 AEEQLHAHKK QAVFLTQLAA KTLPKGLHCL PLRLANEYFS LDPDRQQLPN QHKLTNPKLY 180 HYALFSDNIL ATAVVVNSTV LNAKHPSDHV FHIVTDRLNY APMRMWFLSN PPGKATIEVQ 240 NIGEFTWLND SYSPVLKQLG SQSMIDYYFG TNRANPDSNL KYRNPKYLSI LNHLRFYLPE 300 IYPKLDKMVF LDDDIVVKKD LTGLWSINMK GKVNGAVETC GESFHRFDRY LNFSNPVIAK 360 NFDPHACGWA FGMNVFDLAE WKRQTYQIIT HGRSL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02523 | PLN02523 | 2.0e-122 | 82 | 384 | 309 | + galacturonosyltransferase | ||
PLN02742 | PLN02742 | 5.0e-144 | 34 | 391 | 365 | + Probable galacturonosyltransferase | ||
PLN02718 | PLN02718 | 1.0e-152 | 30 | 384 | 358 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 2.0e-161 | 30 | 391 | 366 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 1 | 395 | 402 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN31213.1 | 0 | 1 | 392 | 163 | 554 | unknown [Zea mays] |
GenBank | EEC83383.1 | 0 | 1 | 392 | 144 | 526 | hypothetical protein OsI_28798 [Oryza sativa Indica Group] |
RefSeq | NP_001061555.1 | 0 | 1 | 392 | 166 | 548 | Os08g0327100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148932.1 | 0 | 1 | 391 | 162 | 552 | transferase, transferring glycosyl groups [Zea mays] |
RefSeq | XP_002444200.1 | 0 | 1 | 391 | 162 | 552 | hypothetical protein SORBIDRAFT_07g014890 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GT040815 | 314 | 19 | 332 | 0 |
HO801774 | 352 | 30 | 381 | 0 |
HO795725 | 369 | 34 | 395 | 0 |
GO877254 | 282 | 111 | 392 | 0 |
GT040815 | 28 | 330 | 357 | 0.00000007 |
Sequence Alignments (This image is cropped. Click for full image.) |
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