y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00042520m |
Family | CE10 |
Protein Properties | Length: 329 Molecular Weight: 34522.4 Isoelectric Point: 8.0323 |
Chromosome | Chromosome/Scaffold: 0167366 Start: 241 End: 1335 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 48 | 314 | 0 |
GPRRIVVHSNDVPLSEAAGTGLRLFVPSGGHARLPLIVYFHGGGYVLFRAASEPFHNTCTALAAAVPAAVASVDYRLAPEHRLPAAFEDAADAVLWARPH VAAGRPVFVMGSHNGASIAFRAALAAADAGVELRGVILNQPHLGGAARSPAEAASVDDRVLPLPANDLLWELALPVGADRDHEYCNPEPMLARVGAARLR RLPPCLVLGRRKDPPRDRTRTLANALRKAGGAVEARLDGAGYHAMELFKPNCAAEFTAQVADFVRRH |
Full Sequence |
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Protein Sequence Length: 329 Download |
MDPYKYLKIR FNPDGSLYRY GEAPLLPAAP AGEPVAVAAE GSGDGEQGPR RIVVHSNDVP 60 LSEAAGTGLR LFVPSGGHAR LPLIVYFHGG GYVLFRAASE PFHNTCTALA AAVPAAVASV 120 DYRLAPEHRL PAAFEDAADA VLWARPHVAA GRPVFVMGSH NGASIAFRAA LAAADAGVEL 180 RGVILNQPHL GGAARSPAEA ASVDDRVLPL PANDLLWELA LPVGADRDHE YCNPEPMLAR 240 VGAARLRRLP PCLVLGRRKD PPRDRTRTLA NALRKAGGAV EARLDGAGYH AMELFKPNCA 300 AEFTAQVADF VRRHSAAGAG DVVGVSKL* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0657 | Aes | 8.0e-19 | 49 | 314 | 272 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 9.0e-31 | 84 | 291 | 213 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY89280.1 | 0 | 157 | 328 | 1 | 172 | hypothetical protein OsI_10780 [Oryza sativa Indica Group] |
GenBank | EAZ26294.1 | 8e-22 | 1 | 98 | 1 | 100 | hypothetical protein OsJ_10164 [Oryza sativa Japonica Group] |
GenBank | EAZ26294.1 | 0 | 145 | 328 | 75 | 258 | hypothetical protein OsJ_10164 [Oryza sativa Japonica Group] |
RefSeq | NP_001049575.1 | 0 | 1 | 328 | 1 | 326 | Os03g0252100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002465549.1 | 0 | 1 | 328 | 1 | 331 | hypothetical protein SORBIDRAFT_01g040930 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 0 | 5 | 311 | 20 | 327 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2o7r_A | 0 | 5 | 311 | 20 | 327 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_F | 7e-27 | 81 | 311 | 112 | 347 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_E | 7e-27 | 81 | 311 | 112 | 347 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_D | 7e-27 | 81 | 311 | 112 | 347 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL932152 | 225 | 1 | 225 | 0 |
DR821244 | 237 | 1 | 233 | 0 |
EE152448 | 231 | 1 | 227 | 0 |
FL815863 | 162 | 1 | 162 | 0 |
FL815863 | 58 | 177 | 234 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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