Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00042819m |
Family | GT37 |
Protein Properties | Length: 586 Molecular Weight: 65262.7 Isoelectric Point: 9.2101 |
Chromosome | Chromosome/Scaffold: 016837 Start: 5138 End: 8450 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT37 | 102 | 557 | 0 |
TSSPSPDKLLGGLLSAAFDESSCQSRYRSNLYRKPSPFPLSPYLAQKLRKYEAYHKKCGPGTKRYRRAVKQLKSGRNADHSECKYVVWFPCNGLGNRMLT IASTYLYALLTDRVLLTHVAPEQEGLFCEPFPGSSWVLPGDFPENNPHKLHIGAPESYANMLKSGAVRNDGDPSGVPASSLPPYVYLHIEQFQLKLSDNV FCDEDQAVLAKFNWMVLKSDSYFAPALFLTPMFEAELARMFPRKEAVFHHLGRYLFHPTNRVWGIISRYYEAYLARVGEKIGFQIRIFPEKPIKFENMYD QLMRCIREQRLLPELAGAGAEPPANHTAAGGKVKAVLIASLYSGYYEKIRGMYYESPTRNGEVVAVFQPSHEEQQQYTSNEHNQKALAEIYLLSYCDKIA MSAWSTFGYVAYSFAGVKPWILLRPDWDKEVSAVACVRSASVEPCLHSPPQLGCRA |
Full Sequence |
---|
Protein Sequence Length: 586 Download |
MDVKRSRSPR APAEGEDDKK RAGWRGGGGV RPEMVLVGFL LTLPLLFLVF GGRWGSGSFP 60 SSSPSTPTVA ARNVAAGGRG ATPQSKKEPE AVTPKNISAP TTSSPSPDKL LGGLLSAAFD 120 ESSCQSRYRS NLYRKPSPFP LSPYLAQKLR KYEAYHKKCG PGTKRYRRAV KQLKSGRNAD 180 HSECKYVVWF PCNGLGNRML TIASTYLYAL LTDRVLLTHV APEQEGLFCE PFPGSSWVLP 240 GDFPENNPHK LHIGAPESYA NMLKSGAVRN DGDPSGVPAS SLPPYVYLHI EQFQLKLSDN 300 VFCDEDQAVL AKFNWMVLKS DSYFAPALFL TPMFEAELAR MFPRKEAVFH HLGRYLFHPT 360 NRVWGIISRY YEAYLARVGE KIGFQIRIFP EKPIKFENMY DQLMRCIREQ RLLPELAGAG 420 AEPPANHTAA GGKVKAVLIA SLYSGYYEKI RGMYYESPTR NGEVVAVFQP SHEEQQQYTS 480 NEHNQKALAE IYLLSYCDKI AMSAWSTFGY VAYSFAGVKP WILLRPDWDK EVSAVACVRS 540 ASVEPCLHSP PQLGCRARRD VDAAAVKPYV RHCEDVQFGL KLFDT* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd11548 | NodZ_like | 0.0009 | 187 | 219 | 33 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
pfam03254 | XG_FTase | 0 | 91 | 555 | 469 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ24717.1 | 1e-16 | 1 | 82 | 1 | 78 | hypothetical protein OsJ_08487 [Oryza sativa Japonica Group] |
GenBank | EAZ24717.1 | 0 | 90 | 585 | 168 | 663 | hypothetical protein OsJ_08487 [Oryza sativa Japonica Group] |
RefSeq | NP_001048209.1 | 0 | 1 | 585 | 1 | 575 | Os02g0763200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001159219.1 | 0 | 199 | 585 | 1 | 387 | hypothetical protein LOC100304305 [Zea mays] |
RefSeq | XP_002452874.1 | 0 | 1 | 585 | 1 | 593 | hypothetical protein SORBIDRAFT_04g034070 [Sorghum bicolor] |