Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00042842m |
Family | CBM43 |
Protein Properties | Length: 114 Molecular Weight: 11725.1 Isoelectric Point: 6.9746 |
Chromosome | Chromosome/Scaffold: 0169000 Start: 788 End: 1356 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 25 | 106 | 6.5e-32 |
WCVCRSDLGDSALQKTLDYACGAGADCKPILQNAPCFAPDTVRAHCSYAVNSFYQRNNQNAQACVFSGTAVLSNTDPSGNGC |
Full Sequence |
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Protein Sequence Length: 114 Download |
MADAARLFLL VAAAAALAGR SDGAWCVCRS DLGDSALQKT LDYACGAGAD CKPILQNAPC 60 FAPDTVRAHC SYAVNSFYQR NNQNAQACVF SGTAVLSNTD PSGNGCTYPA TPR* 120 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-19 | 25 | 95 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-33 | 25 | 108 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM47584.1 | 0 | 1 | 112 | 1 | 112 | putative expressed protein [Sorghum bicolor] |
GenBank | ACG25806.1 | 0 | 1 | 112 | 1 | 112 | glucan endo-1,3-beta-glucosidase 3 precursor [Zea mays] |
RefSeq | NP_001051316.1 | 0 | 2 | 111 | 3 | 112 | Os03g0756300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001152290.1 | 0 | 1 | 112 | 1 | 112 | glucan endo-1,3-beta-glucosidase 3 [Zea mays] |
RefSeq | XP_002463859.1 | 0 | 1 | 112 | 1 | 112 | hypothetical protein SORBIDRAFT_01g007670 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-21 | 20 | 110 | 8 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |