y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00042989m |
Family | CE10 |
Protein Properties | Length: 147 Molecular Weight: 16114.1 Isoelectric Point: 4.5763 |
Chromosome | Chromosome/Scaffold: 0171086 Start: 2072 End: 2512 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 6 | 139 | 8.2e-25 |
AVRGYVQLMPFFGGAERTRSEAECPDDAFLNRPLNDRYWRLSLPEGATADHPVANPFGPGAPPLEAVEMAPTVVVVGGRDILHDRAVDYAARLKAMGKPV EVRDFEGQQHGFFTIDPWSDASAELMRVIKRFVD |
Full Sequence |
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Protein Sequence Length: 147 Download |
ELAPAAVRGY VQLMPFFGGA ERTRSEAECP DDAFLNRPLN DRYWRLSLPE GATADHPVAN 60 PFGPGAPPLE AVEMAPTVVV VGGRDILHDR AVDYAARLKA MGKPVEVRDF EGQQHGFFTI 120 DPWSDASAEL MRVIKRFVDS DGRFDD* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0657 | Aes | 5.0e-10 | 30 | 140 | 111 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 1.0e-25 | 6 | 118 | 113 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC20766.1 | 0 | 7 | 139 | 209 | 341 | putative cell death associated protein [Oryza sativa Japonica Group] |
GenBank | EAZ02866.1 | 0 | 7 | 139 | 212 | 344 | hypothetical protein OsI_24997 [Oryza sativa Indica Group] |
GenBank | EAZ02867.1 | 0 | 1 | 142 | 180 | 322 | hypothetical protein OsI_24998 [Oryza sativa Indica Group] |
RefSeq | NP_001058951.1 | 0 | 1 | 142 | 180 | 322 | Os07g0162900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002461501.1 | 0 | 1 | 145 | 183 | 327 | hypothetical protein SORBIDRAFT_02g003630 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 3e-20 | 7 | 141 | 218 | 351 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 2zsh_A | 3e-20 | 7 | 141 | 218 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 1e-18 | 7 | 141 | 217 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 1e-18 | 7 | 141 | 217 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 1e-18 | 7 | 141 | 217 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL794230 | 147 | 1 | 147 | 0 |
FL931427 | 145 | 1 | 145 | 0 |
FL931428 | 145 | 1 | 145 | 0 |
CN147152 | 145 | 1 | 145 | 0 |
CN125601 | 145 | 1 | 145 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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