Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00043004m |
Family | GT90 |
Protein Properties | Length: 385 Molecular Weight: 44576.9 Isoelectric Point: 8.7041 |
Chromosome | Chromosome/Scaffold: 0168029 Start: 3 End: 2586 |
Description | Arabidopsis thaliana protein of unknown function (DUF821) |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT90 | 87 | 335 | 0 |
RVPDLDLMFDTVDWPVVRTHLYRGKYAEVMPPLFRYCGDDRTLDIVFPDWSFWGWPEINIKPWHALQEDLKDGNNRVRWMDREPYAYWKGNPSVSATRQE LVKCNVSSTQDWNARIYAQDWFKESKTGYKDSDLGSQCSHRYKIYIEGSAWSISQKYILACDSMTLLVTPKYYDFFSRSLMPIQHYWPVRDDNKCASIKY AVDWGNSHKQLAQRIGKQASSFIQEELSMDQVYDYMLHLLTEYAKLLKF |
Full Sequence |
---|
Protein Sequence Length: 385 Download |
PPASSAPPSS NRSCPSYFRF IHEDLRPWRA AGGVTRAMLG RARLTATFRL VVLGGRAYVQ 60 RLRPAFQTRD LFTIWGVLQL LRRYPGRVPD LDLMFDTVDW PVVRTHLYRG KYAEVMPPLF 120 RYCGDDRTLD IVFPDWSFWG WPEINIKPWH ALQEDLKDGN NRVRWMDREP YAYWKGNPSV 180 SATRQELVKC NVSSTQDWNA RIYAQDWFKE SKTGYKDSDL GSQCSHRYKI YIEGSAWSIS 240 QKYILACDSM TLLVTPKYYD FFSRSLMPIQ HYWPVRDDNK CASIKYAVDW GNSHKQLAQR 300 IGKQASSFIQ EELSMDQVYD YMLHLLTEYA KLLKFKPTKP PEAVEVCSES LACQAESLEK 360 KFLIDSMVKS AHDAGPCDLP PPFSS |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05686 | Glyco_transf_90 | 2.0e-40 | 284 | 385 | 102 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
pfam05686 | Glyco_transf_90 | 2.0e-89 | 17 | 184 | 168 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
smart00672 | CAP10 | 4.0e-120 | 87 | 336 | 256 | + Putative lipopolysaccharide-modifying enzyme. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAD41531.1 | 0 | 38 | 384 | 1 | 347 | OSJNBb0020O11.18 [Oryza sativa (japonica cultivar-group)] |
EMBL | CAH67462.1 | 0 | 17 | 384 | 142 | 509 | OSIGBa0159I10.7 [Oryza sativa (indica cultivar-group)] |
RefSeq | NP_001136898.1 | 0 | 1 | 384 | 135 | 518 | hypothetical protein LOC100217055 [Zea mays] |
RefSeq | XP_002446853.1 | 0 | 17 | 383 | 160 | 526 | hypothetical protein SORBIDRAFT_06g023680 [Sorghum bicolor] |
RefSeq | XP_002454569.1 | 0 | 1 | 384 | 136 | 519 | hypothetical protein SORBIDRAFT_04g033620 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
FE635152 | 253 | 52 | 304 | 0 |
EX132718 | 290 | 76 | 365 | 0 |
DV502395 | 217 | 17 | 233 | 0 |
EH727898 | 274 | 110 | 383 | 0 |
FE613579 | 242 | 142 | 383 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|