Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00043038m |
Family | GT8 |
Protein Properties | Length: 558 Molecular Weight: 63621.1 Isoelectric Point: 8.9473 |
Chromosome | Chromosome/Scaffold: 017384 Start: 532 End: 2892 |
Description | galacturonosyltransferase 10 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 217 | 530 | 0 |
CLGVRLTMEWFKSSELQRKFSDRSPTVQNNLRDNSLYHFCVFSDNILAVSVVVNSTAINSKHPEKIVFHLVTDELNYAPMRAWFAMSDYRGVTVDIQKVE DFTWLNASYVPVLKQLQNAATQKFYFSGSGNRGTPIKFRNPKYLSMLNHLRFYIPEIYPELQKVVFLDDDIVVQKDLSELFTINLNGNVMGAVETCMETF HRFHKYLNHSHPLIRAHFDPDACGWAFGMNVLDLVEWRNKNVTGIYHYWQGRNADHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGYTTVDPATIKEG AVLHYNGNMKPWLK |
Full Sequence |
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Protein Sequence Length: 558 Download |
MRRRPFLDQR RPSFKRRWQQ RPWWVRLALS LLLALACVLL LAVLLGSPDP GASPSTSTAS 60 SGSEATSSPL LRQRSYLELE GITDALNMTD EMLSARSFSR QLMDQIYLAK TYVVVAKEAN 120 NLQFAAELSA HVRRAQSILT HAAAHGGTVL EQEAEKAIRD MSVLLFQAQQ LRYDSGITIM 180 KLKGQIQALE EKSKAEAEKS TKYGQIAAEE LPKGLYCLGV RLTMEWFKSS ELQRKFSDRS 240 PTVQNNLRDN SLYHFCVFSD NILAVSVVVN STAINSKHPE KIVFHLVTDE LNYAPMRAWF 300 AMSDYRGVTV DIQKVEDFTW LNASYVPVLK QLQNAATQKF YFSGSGNRGT PIKFRNPKYL 360 SMLNHLRFYI PEIYPELQKV VFLDDDIVVQ KDLSELFTIN LNGNVMGAVE TCMETFHRFH 420 KYLNHSHPLI RAHFDPDACG WAFGMNVLDL VEWRNKNVTG IYHYWQGRNA DHTLWKLGSL 480 PPGLLAFYGL VEALDPKWHV LGLGYTTVDP ATIKEGAVLH YNGNMKPWLK IGMEKYKSFW 540 DNYVDYSHPL IQQCFMR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02718 | PLN02718 | 3.0e-126 | 100 | 554 | 459 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 7.0e-160 | 101 | 554 | 468 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02523 | PLN02523 | 8.0e-162 | 150 | 554 | 410 | + galacturonosyltransferase | ||
PLN02829 | PLN02829 | 1.0e-178 | 92 | 554 | 465 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 2 | 557 | 558 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN27553.1 | 0 | 1 | 557 | 1 | 555 | unknown [Zea mays] |
GenBank | EEC78094.1 | 0 | 1 | 555 | 1 | 554 | hypothetical protein OsI_17583 [Oryza sativa Indica Group] |
RefSeq | NP_001054014.1 | 0 | 1 | 555 | 1 | 554 | Os04g0636100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001140891.1 | 0 | 1 | 557 | 1 | 555 | hypothetical protein LOC100272968 [Zea mays] |
RefSeq | XP_002447180.1 | 0 | 1 | 557 | 1 | 555 | hypothetical protein SORBIDRAFT_06g029980 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.0005 | 356 | 528 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.008 | 356 | 528 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.008 | 356 | 528 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |