Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00043051m |
Family | GH9 |
Protein Properties | Length: 523 Molecular Weight: 56989 Isoelectric Point: 8.2606 |
Chromosome | Chromosome/Scaffold: 017448 Start: 4269 End: 5951 |
Description | glycosyl hydrolase 9B8 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 44 | 511 | 0 |
DYKRALHSSLLYFEAQRSGHLPYNQRVRWRGHSGLADGLQQGVDLVGGYYDAGDNVKFGLPMAFTVTMLSWSAAEFGAEVAAAGEWRHLLETIKWGTDYL VKAHAEPDVLWAEVGDGDTDHYCWQRPEDMTTSRQAYKVDRENPGSDLAGETAAAMAAASIVFRRSDSRYSDLLLRHAEQLFEFGDRYRGKYDASVGEAW RYYASVSGYGDEMLWAALWLHRATGRAEYLDYAVAMADEFGGTTWAITEFSWDVKYAGLQILAAKLLLEGRHRPEHRATLEQYRSKAEHYLCACLGKNGA AGNVNRTAGGMLFVRQWNNLQYVTNAAFLLTAYSRYLTASGASAAALRCPGGAAGAGELVALARAQAEYVLGANPAGMSYMVGYGRRFPRRVHHRAASIV SHRADGGFVGCVQGYDLWFRRPGANPNVVVGAIVGGPDHRDRFSDRRSNYMQTEACTYNTAPMVGVFA |
Full Sequence |
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Protein Sequence Length: 523 Download |
MARGGGGIKT TLASLCSAVV LTMMFQLAAA AGGGGHGAGS SSFDYKRALH SSLLYFEAQR 60 SGHLPYNQRV RWRGHSGLAD GLQQGVDLVG GYYDAGDNVK FGLPMAFTVT MLSWSAAEFG 120 AEVAAAGEWR HLLETIKWGT DYLVKAHAEP DVLWAEVGDG DTDHYCWQRP EDMTTSRQAY 180 KVDRENPGSD LAGETAAAMA AASIVFRRSD SRYSDLLLRH AEQLFEFGDR YRGKYDASVG 240 EAWRYYASVS GYGDEMLWAA LWLHRATGRA EYLDYAVAMA DEFGGTTWAI TEFSWDVKYA 300 GLQILAAKLL LEGRHRPEHR ATLEQYRSKA EHYLCACLGK NGAAGNVNRT AGGMLFVRQW 360 NNLQYVTNAA FLLTAYSRYL TASGASAAAL RCPGGAAGAG ELVALARAQA EYVLGANPAG 420 MSYMVGYGRR FPRRVHHRAA SIVSHRADGG FVGCVQGYDL WFRRPGANPN VVVGAIVGGP 480 DHRDRFSDRR SNYMQTEACT YNTAPMVGVF AHLHSQGARE RK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00759 | Glyco_hydro_9 | 2.0e-179 | 44 | 511 | 470 | + Glycosyl hydrolase family 9. | ||
PLN02420 | PLN02420 | 0 | 43 | 513 | 471 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 44 | 513 | 470 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 43 | 515 | 473 | + endoglucanase | ||
PLN00119 | PLN00119 | 0 | 44 | 513 | 470 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ07048.1 | 0 | 43 | 516 | 35 | 509 | hypothetical protein OsI_29295 [Oryza sativa Indica Group] |
GenBank | EEE68717.1 | 0 | 14 | 516 | 6 | 491 | hypothetical protein OsJ_27375 [Oryza sativa Japonica Group] |
Swiss-Prot | Q84Q51 | 0 | 14 | 516 | 6 | 509 | GUN21_ORYSJ RecName: Full=Endoglucanase 21; AltName: Full=Endo-1,4-beta glucanase 21; AltName: Full=OsGLU9; Flags: Precursor |
RefSeq | XP_002445507.1 | 0 | 12 | 519 | 2 | 502 | hypothetical protein SORBIDRAFT_07g020700 [Sorghum bicolor] |
RefSeq | XP_002462339.1 | 0 | 44 | 521 | 46 | 533 | hypothetical protein SORBIDRAFT_02g024050 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 42 | 502 | 2 | 418 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |
PDB | 1ksc_A | 0 | 42 | 502 | 2 | 418 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |
PDB | 1ks8_A | 0 | 42 | 502 | 2 | 418 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 40 | 514 | 21 | 460 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 41 | 502 | 2 | 430 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |