Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00043409m |
Family | GT43 |
Protein Properties | Length: 234 Molecular Weight: 24886.3 Isoelectric Point: 10.0919 |
Chromosome | Chromosome/Scaffold: 0302921 Start: 210 End: 1230 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 138 | 233 | 7.5e-39 |
LAHTLRLVRPPVVWVVVEPVADAPATAEVLRGTGVMYRHIAFKPEENFTTAAAEAHAQRNAALAHVEKHRLAGVLHFADAAGVYDTGFFDQIRQIE |
Full Sequence |
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Protein Sequence Length: 234 Download |
MGTGAVAVVA PDRAKQRRGG HLWKKALLHF SLCFVMGFFT GFAPSSSSSW KAATQHPPHR 60 AGDHLAASRV AVDARVNLVP SPPDTAGEVG LGGAGGGATV DVGDDDEEAG LRRLLIVVTT 120 TRSGAGERRR RRAELLRLAH TLRLVRPPVV WVVVEPVADA PATAEVLRGT GVMYRHIAFK 180 PEENFTTAAA EAHAQRNAAL AHVEKHRLAG VLHFADAAGV YDTGFFDQIR QIE* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03360 | Glyco_transf_43 | 3.0e-6 | 167 | 233 | 73 | + Glycosyltransferase family 43. | ||
PLN02458 | PLN02458 | 1.0e-11 | 12 | 49 | 38 | + transferase, transferring glycosyl groups | ||
cd00218 | GlcAT-I | 5.0e-14 | 167 | 233 | 70 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
PLN02458 | PLN02458 | 5.0e-18 | 167 | 233 | 67 | + transferase, transferring glycosyl groups |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAI93177.1 | 0 | 1 | 233 | 1 | 240 | glycosyltransferase [Saccharum officinarum] |
RefSeq | NP_001054510.1 | 0 | 1 | 233 | 1 | 225 | Os05g0123100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001105785.1 | 0 | 1 | 233 | 1 | 232 | beta3-glucuronyltransferase [Zea mays] |
RefSeq | NP_001140833.1 | 0 | 1 | 233 | 1 | 232 | hypothetical protein LOC100272909 [Zea mays] |
RefSeq | XP_002439203.1 | 0 | 1 | 233 | 1 | 243 | hypothetical protein SORBIDRAFT_09g002200 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v84_B | 0.000006 | 117 | 230 | 7 | 128 | A Chain A, Crystal Structure Of Puromycin Hydrolase S511a Mutant |
PDB | 1v84_A | 0.000006 | 117 | 230 | 7 | 128 | A Chain A, Crystal Structure Of Puromycin Hydrolase S511a Mutant |
PDB | 1v83_B | 0.000006 | 117 | 230 | 7 | 128 | A Chain A, Crystal Structure Of Puromycin Hydrolase S511a Mutant |
PDB | 1v83_A | 0.000006 | 117 | 230 | 7 | 128 | A Chain A, Crystal Structure Of Puromycin Hydrolase S511a Mutant |
PDB | 1v82_B | 0.000006 | 117 | 230 | 7 | 128 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |