Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00043865m |
Family | AA1 |
Protein Properties | Length: 548 Molecular Weight: 60527.3 Isoelectric Point: 8.7364 |
Chromosome | Chromosome/Scaffold: 038176 Start: 2589 End: 6350 |
Description | SKU5 similar 5 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 52 | 502 | 0 |
EGILINGQFPGPQIEAVTNDNIIVNVFNNLPVPFLLSWQGIQQRRSSWQDGVYGTNCPIPPGGNFTYNMQFKDQIGSYYYFPSLLFHKAAGGYGGIRVLS RPRIPVPFDPPAGDFTILAGDWFKLNHTDLKGILDSGNDLSFPDGLLINGQGSNGNRFTVDQGKTYRFRVSNVGIATSVNIRIQGHSMLLVEVEGSHTMQ TTFTSIDIHLGQSYSFLVTADQPPADYSIIVSTRFITPVLTTTAILHYSNANGAATVPPPPAPTTEIDFSLNQARSIRWNLTASGPRPNPQGSYHYGLVN TTRTIRLANSRATINGKLRYAVNSISFIPADTPLKVADFYNISGVFTLGSMPDNPTSGGAYLQTSVMAANMREYVEIIFENAENFVQSWHIDGYAFWVVG MDGGQWTPASRQGYNLRDAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSES |
Full Sequence |
---|
Protein Sequence Length: 548 Download |
MEPRSSSSSA LAAAALLLAS SLLLAARADD PYRFYTWNVT FGDIYPLGVK QEGILINGQF 60 PGPQIEAVTN DNIIVNVFNN LPVPFLLSWQ GIQQRRSSWQ DGVYGTNCPI PPGGNFTYNM 120 QFKDQIGSYY YFPSLLFHKA AGGYGGIRVL SRPRIPVPFD PPAGDFTILA GDWFKLNHTD 180 LKGILDSGND LSFPDGLLIN GQGSNGNRFT VDQGKTYRFR VSNVGIATSV NIRIQGHSML 240 LVEVEGSHTM QTTFTSIDIH LGQSYSFLVT ADQPPADYSI IVSTRFITPV LTTTAILHYS 300 NANGAATVPP PPAPTTEIDF SLNQARSIRW NLTASGPRPN PQGSYHYGLV NTTRTIRLAN 360 SRATINGKLR YAVNSISFIP ADTPLKVADF YNISGVFTLG SMPDNPTSGG AYLQTSVMAA 420 NMREYVEIIF ENAENFVQSW HIDGYAFWVV GMDGGQWTPA SRQGYNLRDA IARYTLQVYP 480 QSWTAIYMPL DNVGMWNVRS ESWARQYLGQ QFYLRVYSPA NSWRDENPIP KNALLCGRAS 540 GRRTRPL* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 0 | 28 | 547 | 521 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 27 | 544 | 521 | + oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 27 | 544 | 518 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 27 | 541 | 523 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 31 | 540 | 521 | + copper ion binding / pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ02087.1 | 0 | 27 | 547 | 21 | 542 | hypothetical protein OsI_24168 [Oryza sativa Indica Group] |
GenBank | EAZ38022.1 | 0 | 28 | 547 | 12 | 532 | hypothetical protein OsJ_22366 [Oryza sativa Japonica Group] |
RefSeq | NP_001058365.1 | 0 | 27 | 547 | 21 | 542 | Os06g0678800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147597.1 | 0 | 26 | 547 | 27 | 548 | LOC100281206 [Zea mays] |
RefSeq | XP_002438855.1 | 0 | 1 | 547 | 1 | 546 | hypothetical protein SORBIDRAFT_10g027270 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 33 | 537 | 4 | 539 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 1asq_A | 0 | 33 | 537 | 4 | 539 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 1asp_B | 0 | 33 | 537 | 4 | 539 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 1asp_A | 0 | 33 | 537 | 4 | 539 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 1aso_B | 0 | 33 | 537 | 4 | 539 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |