Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00043956m |
Family | CE10 |
Protein Properties | Length: 325 Molecular Weight: 34369.9 Isoelectric Point: 4.9797 |
Chromosome | Chromosome/Scaffold: 037972 Start: 4683 End: 5657 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 51 | 322 | 0 |
VASGDVVISPNVSARLYLPRLGDGAAKLPVLVYYHGGGFCLGSAFNPTFHAYFNSFAALASVLVVSVEYRLAPEHPVPAAYADSWEALAWVVSHLAGGGG DPWVAGHADFGRLYLGGESAGSNIAHHMAMRVAAEGLPHGAQIRGLVMIHPYFLGTDKVPSDDLDPVARESLGSLWRVMCPATTGEDDPLINPFVDGAPP LASLACGRVLVCVGESDVLRDRGGAYYDRLRASGWQGEAAIWQAPNKGHTFHLLEPSCAEAVAQDKVISDFL |
Full Sequence |
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Protein Sequence Length: 325 Download |
MAAFPVAPPP AAADDEIVYE SMPCIRIYKN RVERYFGSEF VAASTDAATG VASGDVVISP 60 NVSARLYLPR LGDGAAKLPV LVYYHGGGFC LGSAFNPTFH AYFNSFAALA SVLVVSVEYR 120 LAPEHPVPAA YADSWEALAW VVSHLAGGGG DPWVAGHADF GRLYLGGESA GSNIAHHMAM 180 RVAAEGLPHG AQIRGLVMIH PYFLGTDKVP SDDLDPVARE SLGSLWRVMC PATTGEDDPL 240 INPFVDGAPP LASLACGRVL VCVGESDVLR DRGGAYYDRL RASGWQGEAA IWQAPNKGHT 300 FHLLEPSCAE AVAQDKVISD FLNS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2272 | PnbA | 1.0e-6 | 74 | 260 | 222 | + Carboxylesterase type B [Lipid metabolism] | ||
cd00312 | Esterase_lipase | 4.0e-8 | 66 | 191 | 141 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
pfam00135 | COesterase | 2.0e-11 | 66 | 191 | 139 | + Carboxylesterase family. | ||
COG0657 | Aes | 2.0e-27 | 59 | 324 | 271 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 5.0e-45 | 81 | 303 | 227 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC83733.1 | 0 | 14 | 323 | 14 | 326 | hypothetical protein OsI_29586 [Oryza sativa Indica Group] |
RefSeq | NP_001062036.1 | 0 | 14 | 323 | 14 | 326 | Os08g0475400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149234.1 | 0 | 14 | 323 | 14 | 326 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | NP_001150584.1 | 0 | 12 | 323 | 12 | 326 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | XP_002442315.1 | 0 | 14 | 323 | 14 | 334 | hypothetical protein SORBIDRAFT_08g017820 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 2e-35 | 41 | 284 | 41 | 293 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 2o7r_A | 2e-35 | 41 | 284 | 41 | 293 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_F | 3e-33 | 52 | 324 | 84 | 349 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_E | 3e-33 | 52 | 324 | 84 | 349 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_D | 3e-33 | 52 | 324 | 84 | 349 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL784317 | 232 | 24 | 255 | 0 |
FL829875 | 242 | 14 | 255 | 0 |
FL930662 | 242 | 14 | 255 | 0 |
FL951782 | 242 | 14 | 255 | 0 |
FL937977 | 229 | 14 | 242 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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