Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00044082m |
Family | GH3 |
Protein Properties | Length: 674 Molecular Weight: 72800.7 Isoelectric Point: 7.9821 |
Chromosome | Chromosome/Scaffold: 038272 Start: 3218 End: 5772 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 154 | 388 | 0 |
STRLGIPMIYGIDAVHGHNNVYGATIFPHNVALGATRDPDLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTELIPGLQG DVPQNFTSGMPYVAGQNKVAACAKHFVGDGGTHDGINENNTIIDKQGLMSIHMPAYLDSLRKGVSTVMISYSSWNGIKMHANHNLITNFLKGRLNFKGFT ISDWEGIDRITSPAGANYSYSVQAGILAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 674 Download |
MGGELAGRIR SGVLEPLEDR FTEILIRSLQ CYDAQVRRRL VPLLRRHRMA LLTAPAVAAL 60 LLLFWSAAYG DAQLPYKDPS LPVEARVKDL LGRMTLAEKI GQMTQIERKV ASPQVLKDNF 120 IGSLLSGGGS VPRLQATAAE WVSMISDFQK ACLSTRLGIP MIYGIDAVHG HNNVYGATIF 180 PHNVALGATR DPDLVKRIGA ATALEVRATG IQYAFAPCIA VCRDPRWGRC YESYSEDHKI 240 VQAMTELIPG LQGDVPQNFT SGMPYVAGQN KVAACAKHFV GDGGTHDGIN ENNTIIDKQG 300 LMSIHMPAYL DSLRKGVSTV MISYSSWNGI KMHANHNLIT NFLKGRLNFK GFTISDWEGI 360 DRITSPAGAN YSYSVQAGIL AGIDMIMVPN NYQSFISILT GHVNSGVIPM SRIDDAVTRI 420 LRVKFTMGLF ENPMPDATLA DQLGKKEHRD LAREAVRKSL VLLKNGKPGA PLLPLPKKAA 480 KILVAGTHAD NLGYQCGGWT IEWQGDTGRI TVGTTILDAV KAAVDPSTTV VFAENPDADF 540 VRNGGFSYAI VAVGEHPYTE TQGDSMNLTI PDPGPSTIQT VCGAVRCATV LISGRPVVIQ 600 PFLAATDALV AAWLPGTEGQ GVTDVLFGDY GFTGKLPRTW FKSVDQLPMN VGDAHYDPLF 660 PFGFGLTTKG NAY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-35 | 75 | 673 | 659 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-39 | 482 | 667 | 206 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 9.0e-73 | 72 | 667 | 683 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 2.0e-78 | 94 | 526 | 440 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 8.0e-87 | 95 | 423 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1LQ2 | 0 | 76 | 669 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
GenBank | AAD23382.1 | 0 | 76 | 669 | 30 | 625 | AF102868_1 beta-D-glucan exohydrolase isoenzyme ExoI [Hordeum vulgare subsp. vulgare] |
GenBank | AAL58976.1 | 0 | 8 | 673 | 12 | 677 | AC091811_25 putative exohydrolase [Oryza sativa Japonica Group] |
RefSeq | NP_001051277.1 | 0 | 76 | 673 | 28 | 626 | Os03g0749500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001104913.1 | 0 | 70 | 673 | 23 | 632 | LOC541703 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 76 | 669 | 5 | 600 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1x38_A | 0 | 76 | 669 | 5 | 600 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1lq2_A | 0 | 76 | 669 | 5 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 76 | 668 | 5 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 76 | 668 | 5 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |