Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00044083m |
Family | GH3 |
Protein Properties | Length: 649 Molecular Weight: 69970.7 Isoelectric Point: 8.6547 |
Chromosome | Chromosome/Scaffold: 038272 Start: 1557 End: 5772 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 129 | 363 | 0 |
STRLGIPMIYGIDAVHGHNNVYGATIFPHNVALGATRDPDLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTELIPGLQG DVPQNFTSGMPYVAGQNKVAACAKHFVGDGGTHDGINENNTIIDKQGLMSIHMPAYLDSLRKGVSTVMISYSSWNGIKMHANHNLITNFLKGRLNFKGFT ISDWEGIDRITSPAGANYSYSVQAGILAGIDMIMV |
Full Sequence |
---|
Protein Sequence Length: 649 Download |
MGMGMKLLAR VRRRLVPLLR RHRMALLTAP AVAALLLLFW SAAYGDAQLP YKDPSLPVEA 60 RVKDLLGRMT LAEKIGQMTQ IERKVASPQV LKDNFIGSLL SGGGSVPRLQ ATAAEWVSMI 120 SDFQKACLST RLGIPMIYGI DAVHGHNNVY GATIFPHNVA LGATRDPDLV KRIGAATALE 180 VRATGIQYAF APCIAVCRDP RWGRCYESYS EDHKIVQAMT ELIPGLQGDV PQNFTSGMPY 240 VAGQNKVAAC AKHFVGDGGT HDGINENNTI IDKQGLMSIH MPAYLDSLRK GVSTVMISYS 300 SWNGIKMHAN HNLITNFLKG RLNFKGFTIS DWEGIDRITS PAGANYSYSV QAGILAGIDM 360 IMVPNNYQSF ISILTGHVNS GVIPMSRIDD AVTRILRVKF TMGLFENPMP DATLADQLGK 420 KEHRDLAREA VRKSLVLLKN GKPGAPLLPL PKKAAKILVA GTHADNLGYQ CGGWTIEWQG 480 DTGRITVGTT ILDAVKAAVD PSTTVVFAEN PDADFVRNGG FSYAIVAVGE HPYTETQGDS 540 MNLTIPDPGP STIQTVCGAV RCATVLISGR PVVIQPFLAA TDALVAAWLP GTEGQGVTDV 600 LFGDYGFTGK LPRTWFKSVD QLPMNVGDAH YDPLFPFGFG LTTKGNAY* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-35 | 50 | 648 | 659 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-39 | 457 | 642 | 206 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-72 | 47 | 642 | 683 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 2.0e-78 | 69 | 501 | 440 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 9.0e-87 | 70 | 398 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD23382.1 | 0 | 51 | 643 | 30 | 624 | AF102868_1 beta-D-glucan exohydrolase isoenzyme ExoI [Hordeum vulgare subsp. vulgare] |
GenBank | AAL58976.1 | 0 | 51 | 648 | 79 | 677 | AC091811_25 putative exohydrolase [Oryza sativa Japonica Group] |
GenBank | ADC55526.1 | 0 | 51 | 643 | 7 | 601 | beta-D-glucan glucohydrolase precursor [synthetic construct] |
RefSeq | NP_001051277.1 | 0 | 51 | 648 | 28 | 626 | Os03g0749500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001104913.1 | 0 | 45 | 648 | 23 | 632 | LOC541703 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 51 | 643 | 5 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 51 | 643 | 5 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iew_A | 0 | 51 | 643 | 5 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iev_A | 0 | 51 | 643 | 5 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1ieq_A | 0 | 51 | 643 | 5 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |