Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00044084m |
Family | GH3 |
Protein Properties | Length: 626 Molecular Weight: 67172.1 Isoelectric Point: 7.1839 |
Chromosome | Chromosome/Scaffold: 038272 Start: 2594 End: 5772 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 106 | 340 | 0 |
STRLGIPMIYGIDAVHGHNNVYGATIFPHNVALGATRDPDLVKRIGAATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTELIPGLQG DVPQNFTSGMPYVAGQNKVAACAKHFVGDGGTHDGINENNTIIDKQGLMSIHMPAYLDSLRKGVSTVMISYSSWNGIKMHANHNLITNFLKGRLNFKGFT ISDWEGIDRITSPAGANYSYSVQAGILAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 626 Download |
MALLTAPAVA ALLLLFWSAA YGDAQLPYKD PSLPVEARVK DLLGRMTLAE KIGQMTQIER 60 KVASPQVLKD NFIGSLLSGG GSVPRLQATA AEWVSMISDF QKACLSTRLG IPMIYGIDAV 120 HGHNNVYGAT IFPHNVALGA TRDPDLVKRI GAATALEVRA TGIQYAFAPC IAVCRDPRWG 180 RCYESYSEDH KIVQAMTELI PGLQGDVPQN FTSGMPYVAG QNKVAACAKH FVGDGGTHDG 240 INENNTIIDK QGLMSIHMPA YLDSLRKGVS TVMISYSSWN GIKMHANHNL ITNFLKGRLN 300 FKGFTISDWE GIDRITSPAG ANYSYSVQAG ILAGIDMIMV PNNYQSFISI LTGHVNSGVI 360 PMSRIDDAVT RILRVKFTMG LFENPMPDAT LADQLGKKEH RDLAREAVRK SLVLLKNGKP 420 GAPLLPLPKK AAKILVAGTH ADNLGYQCGG WTIEWQGDTG RITVGTTILD AVKAAVDPST 480 TVVFAENPDA DFVRNGGFSY AIVAVGEHPY TETQGDSMNL TIPDPGPSTI QTVCGAVRCA 540 TVLISGRPVV IQPFLAATDA LVAAWLPGTE GQGVTDVLFG DYGFTGKLPR TWFKSVDQLP 600 MNVGDAHYDP LFPFGFGLTT KGNAY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 1.0e-35 | 27 | 625 | 659 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-39 | 434 | 619 | 206 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 4.0e-73 | 24 | 619 | 683 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 8.0e-79 | 46 | 478 | 440 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-87 | 47 | 375 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD23382.1 | 0 | 28 | 620 | 30 | 624 | AF102868_1 beta-D-glucan exohydrolase isoenzyme ExoI [Hordeum vulgare subsp. vulgare] |
GenBank | AAL58976.1 | 0 | 28 | 625 | 79 | 677 | AC091811_25 putative exohydrolase [Oryza sativa Japonica Group] |
GenBank | ADC55526.1 | 0 | 28 | 620 | 7 | 601 | beta-D-glucan glucohydrolase precursor [synthetic construct] |
RefSeq | NP_001051277.1 | 0 | 28 | 625 | 28 | 626 | Os03g0749500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001104913.1 | 0 | 22 | 625 | 23 | 632 | LOC541703 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 28 | 620 | 5 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1x38_A | 0 | 28 | 620 | 5 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1lq2_A | 0 | 28 | 620 | 5 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 28 | 620 | 5 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 28 | 620 | 5 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |