| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00044338m |
| Family | GH9 |
| Protein Properties | Length: 360 Molecular Weight: 40347.5 Isoelectric Point: 8.3757 |
| Chromosome | Chromosome/Scaffold: 037840 Start: 3611 End: 6653 |
| Description | Six-hairpin glycosidases superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH9 | 110 | 353 | 0 |
| QYTEALHKALRFFNAQKSGRLPKNNGVPWRGNSGLSDGSDAKDVKGGLVGGYYDAGDNIKFHFPMAFSMTMLSWSVIEYSAKYKAVGEYDHVRELIKWGT DYLLLTFNSSASTIDKIYAQVGAAKINGSQPDDHYCWNRPEDMSYRRPTIAVSSAPDLGGEIAAALAAASIVFRDNAAYSKKLTHGAATVYKFARQAGHR TPYSLRQPDIEYYYNSTSYWDEFMWSAAWMYYATGNTSYISFAT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 360 Download |
| MYAANHWGGS FEIADGAAED DHSRNMDLDR GALSRQQHHE LDETQQSWLL GPPEAKKKDK 60 YVDLGCVVVK RKLLWWAFWC VVGAFVLIGL PIIIAKSIPH KKHGPPPPDQ YTEALHKALR 120 FFNAQKSGRL PKNNGVPWRG NSGLSDGSDA KDVKGGLVGG YYDAGDNIKF HFPMAFSMTM 180 LSWSVIEYSA KYKAVGEYDH VRELIKWGTD YLLLTFNSSA STIDKIYAQV GAAKINGSQP 240 DDHYCWNRPE DMSYRRPTIA VSSAPDLGGE IAAALAAASI VFRDNAAYSK KLTHGAATVY 300 KFARQAGHRT PYSLRQPDIE YYYNSTSYWD EFMWSAAWMY YATGNTSYIS FATDPRLPKN 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 2.0e-58 | 109 | 354 | 250 | + endoglucanase | ||
| PLN02171 | PLN02171 | 8.0e-59 | 111 | 351 | 246 | + endoglucanase | ||
| PLN02266 | PLN02266 | 1.0e-67 | 89 | 351 | 269 | + endoglucanase | ||
| PLN02345 | PLN02345 | 1.0e-69 | 114 | 353 | 245 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 2.0e-83 | 111 | 355 | 250 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG29946.1 | 0 | 1 | 360 | 1 | 360 | glycoside transferase, six-hairpin, subgroup [Zea mays] |
| GenBank | EAY94707.1 | 0 | 1 | 360 | 1 | 378 | hypothetical protein OsI_16485 [Oryza sativa Indica Group] |
| RefSeq | NP_001053204.1 | 0 | 1 | 360 | 1 | 360 | Os04g0497200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147970.1 | 0 | 1 | 360 | 1 | 360 | glycoside transferase, six-hairpin, subgroup [Zea mays] |
| RefSeq | XP_002446733.1 | 0 | 1 | 357 | 1 | 364 | hypothetical protein SORBIDRAFT_06g021440 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 111 | 352 | 5 | 235 | A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean |
| PDB | 1ksc_A | 0 | 111 | 352 | 5 | 235 | A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean |
| PDB | 1ks8_A | 0 | 111 | 352 | 5 | 235 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 3.00004e-41 | 107 | 352 | 2 | 236 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 3.00004e-41 | 107 | 352 | 2 | 236 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
