y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00044795m |
Family | GT20 |
Protein Properties | Length: 906 Molecular Weight: 101117 Isoelectric Point: 4.9701 |
Chromosome | Chromosome/Scaffold: 025741 Start: 491 End: 4755 |
Description | trehalose-phosphatase/synthase 7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 75 | 572 | 0 |
AADRMIVVSNQLPVVARRRPDGRGWSFSWDEDSLLLQLRDGIPDEMEVLFVGSLRADVPVAEQDEVSQALLDRFRCAPVFLPDHLNDRFYHGFCKRQLWP LFHYMLPFSSSASAATASSSPGNGRFDRSAWEAYVLANKIFFEKVVEVINPEDDYVWVHDYHLMALPTFLRRRFNRLRIGFFLHSPFPSSEIYRTLPVRE EILKALLNCDLIGFHTFDYARHFLSCCSRMLGIEYQSKRGYIGLDYFGRTVGIKIMPVGIHMGQLQSGLRLPDREWRLSELQQQFEGKTVLLGVDDMDIF KGINLKLLAFENMLRTHPKWQGRAVLVQIANPARGKGKDLETIQAEIEESCRRINGDFGQSGYSPVVFIDRDVSSVEKIAYYTIAECVVVTAVRDGMNLT PYEYIVCRQGAPGSESTSEVSGPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEGMNEAISMPEQEKQLRHEKHYRYVSSHDVAYWSRSFTQDLER |
Full Sequence |
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Protein Sequence Length: 906 Download |
MMSRSYTNLL DLAEGNFAAL GLAGGGARRR QGSFGLKRMS RVMTVPGTLS ELDGEDESEP 60 AATNSVASDA PSSLAADRMI VVSNQLPVVA RRRPDGRGWS FSWDEDSLLL QLRDGIPDEM 120 EVLFVGSLRA DVPVAEQDEV SQALLDRFRC APVFLPDHLN DRFYHGFCKR QLWPLFHYML 180 PFSSSASAAT ASSSPGNGRF DRSAWEAYVL ANKIFFEKVV EVINPEDDYV WVHDYHLMAL 240 PTFLRRRFNR LRIGFFLHSP FPSSEIYRTL PVREEILKAL LNCDLIGFHT FDYARHFLSC 300 CSRMLGIEYQ SKRGYIGLDY FGRTVGIKIM PVGIHMGQLQ SGLRLPDREW RLSELQQQFE 360 GKTVLLGVDD MDIFKGINLK LLAFENMLRT HPKWQGRAVL VQIANPARGK GKDLETIQAE 420 IEESCRRING DFGQSGYSPV VFIDRDVSSV EKIAYYTIAE CVVVTAVRDG MNLTPYEYIV 480 CRQGAPGSES TSEVSGPKKS MLVVSEFIGC SPSLSGAIRV NPWNIEATAE GMNEAISMPE 540 QEKQLRHEKH YRYVSSHDVA YWSRSFTQDL ERACKDHFRR TCWGIGLGFG FRVVALDPHF 600 TKLNIDSIVN AYEISESRAI LLDYDGTLVP QTSINKPPSP EVVSIINTLC SDRRNIVFLV 660 SGRDKDTLGE WFASCPKLGI AAEHGYFLRW SRDEEWQTCI QALDFGWMEM AKPVMNLYTE 720 ATDGSSIETK ESALVWHHQD ADPGFGSSQA KELLDHLESV LANEPVTVKS GQFIVEVKPQ 780 GVSKGVVAER ILASMKEGGK QADFVLCIGD DRSDEDMFEN IADIMKRNMV APRTPLFACT 840 VGQKPSKAKF YLDDTFEVVT MLSALADATE PELETDSADE LAASTSSLDI GDEQSESTDR 900 PIGGS* 960 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03063 | PLN03063 | 4.0e-171 | 78 | 868 | 834 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN02205 | PLN02205 | 0 | 1 | 870 | 879 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
pfam00982 | Glyco_transf_20 | 0 | 78 | 572 | 499 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
PRK14501 | PRK14501 | 0 | 78 | 868 | 799 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
cd03788 | GT1_TPS | 0 | 78 | 571 | 494 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN25869.1 | 0 | 39 | 905 | 1 | 874 | unknown [Zea mays] |
GenBank | ACN33296.1 | 0 | 1 | 905 | 1 | 912 | unknown [Zea mays] |
GenBank | EEC71477.1 | 0 | 1 | 904 | 1 | 914 | hypothetical protein OsI_03737 [Oryza sativa Indica Group] |
RefSeq | NP_001044248.1 | 0 | 1 | 904 | 1 | 913 | Os01g0749400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002458490.1 | 0 | 1 | 905 | 1 | 910 | hypothetical protein SORBIDRAFT_03g034640 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gz5_D | 0 | 161 | 572 | 73 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_C | 0 | 161 | 572 | 73 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_B | 0 | 161 | 572 | 73 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_A | 0 | 161 | 572 | 73 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1uqu_B | 0 | 161 | 572 | 74 | 453 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777775 | 781 | 99 | 870 | 0 |
HO779327 | 524 | 119 | 639 | 0 |
HO779327 | 242 | 635 | 872 | 0 |
HO795511 | 469 | 402 | 870 | 0 |
HO777775 | 97 | 1 | 95 | 0.61 |
Sequence Alignments (This image is cropped. Click for full image.) |
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