Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00044972m |
Family | CE10 |
Protein Properties | Length: 339 Molecular Weight: 35466.3 Isoelectric Point: 6.5069 |
Chromosome | Chromosome/Scaffold: 026026 Start: 768 End: 1784 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE10 | 51 | 335 | 0 |
GVESRDVHLGAYSVRLYLPPAAAATAPSARLPVLVYVHGGGFVAESAASPGCHRFLNRLTAACPALGVSVEYRLAPEHPLPAAYDDALAALKWTLSAADP WVAAHGDLDRVFLAGDSAGANICHYLAVHPDVVDARTPQDDGKGGGALARRRLKGAVLIHPWFWGSKAVGGEPRHPAARAMGARLWLFACPGADGMDDPR MNPLAPGAPGLGTMACERVMVCAAEHDFLRWRGRAYAEAVAAARGAEGEGSVELLETEGEGHVFYVYKPDGDKAKAMLDRIVSFV |
Full Sequence |
---|
Protein Sequence Length: 339 Download |
MASTTNTAPS GVDSADEVLH EFGIVRVYKS GRVERPLVAP PVAPGLDGAT GVESRDVHLG 60 AYSVRLYLPP AAAATAPSAR LPVLVYVHGG GFVAESAASP GCHRFLNRLT AACPALGVSV 120 EYRLAPEHPL PAAYDDALAA LKWTLSAADP WVAAHGDLDR VFLAGDSAGA NICHYLAVHP 180 DVVDARTPQD DGKGGGALAR RRLKGAVLIH PWFWGSKAVG GEPRHPAARA MGARLWLFAC 240 PGADGMDDPR MNPLAPGAPG LGTMACERVM VCAAEHDFLR WRGRAYAEAV AAARGAEGEG 300 SVELLETEGE GHVFYVYKPD GDKAKAMLDR IVSFVNAP* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2272 | PnbA | 8.0e-5 | 81 | 178 | 109 | + Carboxylesterase type B [Lipid metabolism] | ||
pfam00135 | COesterase | 6.0e-6 | 80 | 181 | 122 | + Carboxylesterase family. | ||
cd00312 | Esterase_lipase | 3.0e-6 | 80 | 181 | 110 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
COG0657 | Aes | 1.0e-13 | 32 | 337 | 317 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 1.0e-28 | 84 | 315 | 236 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY86351.1 | 0 | 1 | 336 | 1 | 316 | hypothetical protein OsI_07729 [Oryza sativa Indica Group] |
RefSeq | NP_001047179.1 | 0 | 1 | 336 | 1 | 313 | Os02g0567800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148459.1 | 0 | 1 | 338 | 1 | 334 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | NP_001150025.1 | 0 | 1 | 338 | 1 | 332 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | XP_002452312.1 | 0 | 13 | 338 | 18 | 341 | hypothetical protein SORBIDRAFT_04g023520 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 2e-30 | 33 | 318 | 32 | 324 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2o7r_A | 2e-30 | 33 | 318 | 32 | 324 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 2zsi_A | 5e-26 | 65 | 337 | 86 | 350 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 2zsh_A | 5e-26 | 65 | 337 | 86 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 2e-24 | 76 | 337 | 106 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EE016167 | 270 | 13 | 281 | 0 |
EE015724 | 265 | 18 | 281 | 0 |
EE043216 | 251 | 31 | 281 | 0 |
EE043215 | 251 | 31 | 281 | 0 |
EE021075 | 251 | 31 | 281 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|