Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00045020m |
Family | GT14 |
Protein Properties | Length: 398 Molecular Weight: 44508.9 Isoelectric Point: 9.177 |
Chromosome | Chromosome/Scaffold: 026518 Start: 2 End: 3305 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 51 | 305 | 0 |
LAYLITGAGLGDGPRIRRLLRALYHPWNCYLVGVAGEDDRADLEAFVRGQEAPRRYGNVRVADAGEWGAVSRRGPTELAATLHAAAVLLREFEGWSWFIN LSASDYPLMPQDDILHIFSYIPRDLNFIDHTSNIGWKEYQRARTIIVDPALQVPNKTEVITTKEKRSLPSAFKIFVGSSWVVLSRSFLEFCLLGWDNLPR TLLMYFTNFLSSSEGYFHTVICNSEYYQNTTINSDLRFIAWDNPPRTHPVNLTTE |
Full Sequence |
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Protein Sequence Length: 398 Download |
PPAHRLRGCA RCSSPLPLLS LPILYAALGA ARSSPPGRPQ QQQQRRPPPK LAYLITGAGL 60 GDGPRIRRLL RALYHPWNCY LVGVAGEDDR ADLEAFVRGQ EAPRRYGNVR VADAGEWGAV 120 SRRGPTELAA TLHAAAVLLR EFEGWSWFIN LSASDYPLMP QDDILHIFSY IPRDLNFIDH 180 TSNIGWKEYQ RARTIIVDPA LQVPNKTEVI TTKEKRSLPS AFKIFVGSSW VVLSRSFLEF 240 CLLGWDNLPR TLLMYFTNFL SSSEGYFHTV ICNSEYYQNT TINSDLRFIA WDNPPRTHPV 300 NLTTEHFDSI ANSGAPFAHS FIHDSPVLDM IDTKLLGRAP DRFTPGGWCL GSSVGGKDPC 360 TFFGRSFVLR PTKGSAKLEK LLLKLLEPDN FRPKQCK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 1.0e-52 | 51 | 311 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 7.0e-117 | 50 | 397 | 351 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF95263.1 | 0 | 48 | 396 | 54 | 401 | glycosyltransferase family 14 protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EEE58795.1 | 0 | 138 | 396 | 1 | 259 | hypothetical protein OsJ_10333 [Oryza sativa Japonica Group] |
RefSeq | NP_001049716.1 | 0 | 48 | 354 | 54 | 359 | Os03g0276900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001152358.1 | 0 | 51 | 397 | 60 | 406 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Zea mays] |
RefSeq | XP_002465469.1 | 0 | 51 | 397 | 68 | 414 | hypothetical protein SORBIDRAFT_01g039410 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000002 | 66 | 317 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000002 | 66 | 317 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000002 | 66 | 317 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000002 | 66 | 317 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000006 | 66 | 317 | 99 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |