y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00045170m |
Family | GH1 |
Protein Properties | Length: 564 Molecular Weight: 62035.9 Isoelectric Point: 7.3004 |
Chromosome | Chromosome/Scaffold: 026085 Start: 1434 End: 5471 |
Description | B-S glucosidase 44 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 48 | 510 | 0 |
DAFPKGFVFGTATSAFQVEGAAASGGRGPSIWDPLVHTPGNIAGDANADVTTDEYHRYKEDVDLMKSLNFDAYRFSISWSRIFPDGEGKVNEEGVQYYNN LIDYMIKQGLTPYANLNHYDLPLALQKKYKGWLGPKIVGIFADYADFCFKTFGDRVKNWFTLNEPRIVAFLGYDTGVNPPNRCTQCAAGGNSATEPYIVV HNIILSHATAVARYRNKYQATQKGKVGIVLDFNWYEPLTNSTEDQAAAQRARDFHVGWFLDPLINGNYPKTMQDIVKDRLPSFTPEQAKLVKGSSDYYGI NQYTTYYISDKQTPQQAATSYSSDWSVQYNFQRNGVPIGQLAHSVWLYIVPTGMYGVVNYLKEKYQNPTIIISENGMDQPGNLTREEYLHDTVRVDFYKN YLTELKKGIDEGANVVAYFAWSLLDNFEWLSGYTSKFGIVYVDFTTLKRYPKDSAYWFRDMLS |
Full Sequence |
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Protein Sequence Length: 564 Download |
MGAAGSAAPP PAAAHCHRAL LALALVSLCG RGLRVRAAGA DTGSLSRDAF PKGFVFGTAT 60 SAFQVEGAAA SGGRGPSIWD PLVHTPGNIA GDANADVTTD EYHRYKEDVD LMKSLNFDAY 120 RFSISWSRIF PDGEGKVNEE GVQYYNNLID YMIKQGLTPY ANLNHYDLPL ALQKKYKGWL 180 GPKIVGIFAD YADFCFKTFG DRVKNWFTLN EPRIVAFLGY DTGVNPPNRC TQCAAGGNSA 240 TEPYIVVHNI ILSHATAVAR YRNKYQATQK GKVGIVLDFN WYEPLTNSTE DQAAAQRARD 300 FHVGWFLDPL INGNYPKTMQ DIVKDRLPSF TPEQAKLVKG SSDYYGINQY TTYYISDKQT 360 PQQAATSYSS DWSVQYNFQR NGVPIGQLAH SVWLYIVPTG MYGVVNYLKE KYQNPTIIIS 420 ENGMDQPGNL TREEYLHDTV RVDFYKNYLT ELKKGIDEGA NVVAYFAWSL LDNFEWLSGY 480 TSKFGIVYVD FTTLKRYPKD SAYWFRDMLS GAGSKSATPQ TGSHTSAGSP AGSTPAASCG 540 PALLVSLLVS LCLLVPSVFI VSS* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 4.0e-133 | 38 | 511 | 482 | + beta-glucosidase | ||
PLN02998 | PLN02998 | 9.0e-134 | 46 | 511 | 474 | + beta-glucosidase | ||
COG2723 | BglB | 3.0e-144 | 49 | 508 | 469 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 2.0e-157 | 51 | 505 | 455 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 3.0e-180 | 46 | 513 | 472 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX95520.1 | 0 | 32 | 563 | 32 | 602 | Putative Glycosyl hydrolase family 1 protein [Oryza sativa Japonica Group] |
GenBank | EEC76023.1 | 0 | 1 | 533 | 1 | 539 | hypothetical protein OsI_13187 [Oryza sativa Indica Group] |
RefSeq | NP_001051014.1 | 0 | 32 | 563 | 32 | 567 | Os03g0703100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151026.1 | 0 | 1 | 538 | 1 | 538 | LOC100284659 [Zea mays] |
RefSeq | XP_002464026.1 | 0 | 31 | 563 | 36 | 566 | hypothetical protein SORBIDRAFT_01g010825 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2rgm_B | 0 | 43 | 510 | 13 | 480 | A Chain A, Structure Of Berberine Bridge Enzyme In Complex With (S)-Reticuline |
PDB | 2rgm_A | 0 | 43 | 510 | 13 | 480 | A Chain A, Structure Of Berberine Bridge Enzyme In Complex With (S)-Reticuline |
PDB | 2rgl_B | 0 | 43 | 510 | 13 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 2rgl_A | 0 | 43 | 510 | 13 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 3f5l_B | 0 | 43 | 510 | 13 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |