Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00045176m |
Family | GH9 |
Protein Properties | Length: 555 Molecular Weight: 60697 Isoelectric Point: 7.913 |
Chromosome | Chromosome/Scaffold: 025701 Start: 3832 End: 7836 |
Description | glycosyl hydrolase 9B8 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 64 | 532 | 0 |
NYGDALQKSLLYFEAQRSGRLPHSQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSLIEYGGDVAAAGELGHALEAVKWGTDYF IKAHTQPDELWAEVGDGDTDHYCWQRPEDMTTSRQAYKVDRDHPGSDVAGETAAAMAAASIVFRDANPHYAHLLLHHAQQLFEFADKYRGKYDSSIAEVK SYYASVSGYKDELLWAALWLHRATGRAEYLDYVVDNADSFGGTGWAINEFSWDVKYAGVQILATRLLLRGEHAARHRSTLERYRAKAERYVCACLDRNAD GGRNVERSPGGMLYIRQWNNMQYVTSAAFLLSAYSDYLAEAGVGAVSCGEGGALAAASEVFALARAQVDYVLGTNPRGVSYLVGYGPKYPNRVHHRAASI VPYKHSKEFIGCTQGFDHWFGRRSSNPNVLVGAIVGGPDRRDRFRDNRENYMQTEACTYNTAPMVGMFA |
Full Sequence |
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Protein Sequence Length: 555 Download |
MTTRARAARR QQPHATAPGG GSTLAMSGAG TAPSCRRRQL GGALLLVLVV LAGGLGGAEG 60 KAHNYGDALQ KSLLYFEAQR SGRLPHSQRV TWRHHSGLTD GLEQGVDLVG GYYDAGDHVK 120 FGLPMAFTVT MLSWSLIEYG GDVAAAGELG HALEAVKWGT DYFIKAHTQP DELWAEVGDG 180 DTDHYCWQRP EDMTTSRQAY KVDRDHPGSD VAGETAAAMA AASIVFRDAN PHYAHLLLHH 240 AQQLFEFADK YRGKYDSSIA EVKSYYASVS GYKDELLWAA LWLHRATGRA EYLDYVVDNA 300 DSFGGTGWAI NEFSWDVKYA GVQILATRLL LRGEHAARHR STLERYRAKA ERYVCACLDR 360 NADGGRNVER SPGGMLYIRQ WNNMQYVTSA AFLLSAYSDY LAEAGVGAVS CGEGGALAAA 420 SEVFALARAQ VDYVLGTNPR GVSYLVGYGP KYPNRVHHRA ASIVPYKHSK EFIGCTQGFD 480 HWFGRRSSNP NVLVGAIVGG PDRRDRFRDN RENYMQTEAC TYNTAPMVGM FAKLHRMARQ 540 EREQGPTPPA AAAV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00119 | PLN00119 | 4.0e-173 | 64 | 534 | 471 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 7.0e-175 | 64 | 532 | 471 | + Glycosyl hydrolase family 9. | ||
PLN02420 | PLN02420 | 0 | 64 | 552 | 489 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 60 | 554 | 498 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 59 | 538 | 480 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY87457.1 | 0 | 59 | 544 | 31 | 517 | hypothetical protein OsI_08866 [Oryza sativa Indica Group] |
RefSeq | NP_001048062.1 | 0 | 59 | 544 | 53 | 539 | Os02g0738600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151436.1 | 0 | 61 | 545 | 41 | 526 | endoglucanase 1 [Zea mays] |
Swiss-Prot | Q6Z5P2 | 0 | 59 | 544 | 31 | 517 | GUN7_ORYSJ RecName: Full=Endoglucanase 7; AltName: Full=Endo-1,4-beta glucanase 7; AltName: Full=OsGLU10; Flags: Precursor |
RefSeq | XP_002454315.1 | 0 | 7 | 549 | 6 | 552 | hypothetical protein SORBIDRAFT_04g028520 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 62 | 521 | 2 | 415 | A Chain A, X-Ray Structure Of The Laminarinase From Rhodothermus Marinus |
PDB | 1ksc_A | 0 | 62 | 521 | 2 | 415 | A Chain A, X-Ray Structure Of The Laminarinase From Rhodothermus Marinus |
PDB | 1ks8_A | 0 | 62 | 521 | 2 | 415 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 62 | 537 | 23 | 462 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 62 | 523 | 3 | 430 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |