| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00045342m |
| Family | GT48 |
| Protein Properties | Length: 1100 Molecular Weight: 126898 Isoelectric Point: 7.3634 |
| Chromosome | Chromosome/Scaffold: 026564 Start: 981 End: 7970 |
| Description | glucan synthase-like 12 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT48 | 206 | 955 | 0 |
| VPSNLEARRRLTFFTNSLFMDMPDAPKVRNMLSFSALTPYYNEPVLFSIKELEEENEDGVSTLFYLQKIYPDEWKNFQERVGLEEELKESEELMEELRLW ASYRGQTLARTVRGMMYYRKALILEAFLDMAKREDLMEGYKAAESVTDEQWKIHQRSLFAQCEAVADMKFTYVVSCQQYGNDKRAALSSAQDILQLMRNY SSLRVAYIDEVEDRVGDKKMETAYYSTLVKVALTKDSEFVDPVQNLDQVIYRIKLPGPAMLGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEALKMRN LLQEFLKEHGVRRPSILGVREHIFTGSVSSLAWFMSNQEHSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKSINLNEDIFAGYNSTLRG GNVTHHEYVQVGKGRDVGLNQISKFEAKVANGNGEQTLSRDIYRLGHRFDFFRMLSCYFTTVGFYFSTLLTVVTVYVFLYGRLYLALSGLEEGLSRGRFI HNHPLQVALASQSLVQLGFLMALPMMMEIGLERGFGKALSEFIMMNLQLAAVFFTFSLGTKTHYYGRMLLHGGAQYRGTGRGFVVFHAKFAENYRLYSRS HFVKGIELMILLIIYQLFGQSYRSTIAYIFITFSMWFLVLTWLFAPFLFNPSGFEWAKIVDDWSDWNKWISNRGGIGVSPDKSWESWWEVEQEHLKYSGT IGIFLEIILAVRFFIYQYGLVYHLHITGNKSILVYLISWLVIVVVLLVMK | |||
| Full Sequence |
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| Protein Sequence Length: 1100 Download |
| PLGVVQWPPF LLASKVPIAV DMAKDSNGKD RDLKKRLDND YYFSCAIEEC YKSFKNIING 60 LVQGVPEKRV INKIFEEVDK YIAEDKVITD LNMRALPDLY NKFIELVNYL EKNDEKDRSA 120 VTKIFQDMLE IVTRDILEDH LSIVESNHGG SYRRNEDTTT WDQEYQLFQP SEAIKFPLKV 180 TDTDAWLEKI KRLELLLTVK ESAMDVPSNL EARRRLTFFT NSLFMDMPDA PKVRNMLSFS 240 ALTPYYNEPV LFSIKELEEE NEDGVSTLFY LQKIYPDEWK NFQERVGLEE ELKESEELME 300 ELRLWASYRG QTLARTVRGM MYYRKALILE AFLDMAKRED LMEGYKAAES VTDEQWKIHQ 360 RSLFAQCEAV ADMKFTYVVS CQQYGNDKRA ALSSAQDILQ LMRNYSSLRV AYIDEVEDRV 420 GDKKMETAYY STLVKVALTK DSEFVDPVQN LDQVIYRIKL PGPAMLGEGK PENQNHAIIF 480 TRGEGLQTID MNQDNYMEEA LKMRNLLQEF LKEHGVRRPS ILGVREHIFT GSVSSLAWFM 540 SNQEHSFVTI GQRLLANPLK VRFHYGHPDV FDRLFHLTRG GVSKASKSIN LNEDIFAGYN 600 STLRGGNVTH HEYVQVGKGR DVGLNQISKF EAKVANGNGE QTLSRDIYRL GHRFDFFRML 660 SCYFTTVGFY FSTLLTVVTV YVFLYGRLYL ALSGLEEGLS RGRFIHNHPL QVALASQSLV 720 QLGFLMALPM MMEIGLERGF GKALSEFIMM NLQLAAVFFT FSLGTKTHYY GRMLLHGGAQ 780 YRGTGRGFVV FHAKFAENYR LYSRSHFVKG IELMILLIIY QLFGQSYRST IAYIFITFSM 840 WFLVLTWLFA PFLFNPSGFE WAKIVDDWSD WNKWISNRGG IGVSPDKSWE SWWEVEQEHL 900 KYSGTIGIFL EIILAVRFFI YQYGLVYHLH ITGNKSILVY LISWLVIVVV LLVMKTVSVG 960 RQRFSADFQL FFRLIKFLIF VSCTAILIVL IVLFQMTLQD TFVCFLAFLP TGWGILLIAQ 1020 ACKPLARQVG LWGSVRALAR AYEIIMGVLL FTPITIFAWF PFVSEFQTRM LFNQAFSRGL 1080 QISRILGGQK KERSSLNKD* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02364 | Glucan_synthase | 0 | 206 | 935 | 800 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM19120.1 | 0 | 2 | 1099 | 521 | 1642 | AC104427_18 Putative glucan synthase [Oryza sativa Japonica Group] |
| GenBank | EEC74436.1 | 0 | 2 | 1099 | 860 | 1957 | hypothetical protein OsI_09824 [Oryza sativa Indica Group] |
| GenBank | EEE58260.1 | 0 | 2 | 1099 | 876 | 1973 | hypothetical protein OsJ_09261 [Oryza sativa Japonica Group] |
| RefSeq | XP_002465944.1 | 0 | 2 | 1099 | 445 | 1545 | hypothetical protein SORBIDRAFT_01g048630 [Sorghum bicolor] |
| RefSeq | XP_002528124.1 | 0 | 2 | 1099 | 852 | 1955 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
