| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00045617m |
| Family | GT77 |
| Protein Properties | Length: 196 Molecular Weight: 22796.9 Isoelectric Point: 6.7196 |
| Chromosome | Chromosome/Scaffold: 0137676 Start: 96 End: 2220 |
| Description | xyloglucanase 113 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT77 | 1 | 155 | 0 |
| MVWLKNPLPYLARYPDADLLTSSDQVIPTVTDDSLENWREVTGAFNIGIFHWRPTEPSKRLAKDWKDLVLSDDKLWDQNAFNDLVHKVFGQPVEGQGDLV YSYDGKLKLGVLPASIFCSGHTYFVQGMYKQLHLEPYAVHTTFQYAGTEGKRHRL | |||
| Full Sequence |
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| Protein Sequence Length: 196 Download |
| MVWLKNPLPY LARYPDADLL TSSDQVIPTV TDDSLENWRE VTGAFNIGIF HWRPTEPSKR 60 LAKDWKDLVL SDDKLWDQNA FNDLVHKVFG QPVEGQGDLV YSYDGKLKLG VLPASIFCSG 120 HTYFVQGMYK QLHLEPYAVH TTFQYAGTEG KRHRLREAML FFDQPSYYDS PGLYTVYTRH 180 KKTVFYFCEW FIQLH* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03407 | Nucleotid_trans | 3.0e-28 | 1 | 155 | 158 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005783 | endoplasmic reticulum |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF97349.1 | 0 | 1 | 172 | 202 | 373 | expressed protein [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC75649.1 | 0 | 1 | 172 | 202 | 373 | hypothetical protein OsI_12401 [Oryza sativa Indica Group] |
| GenBank | EEE59420.1 | 0 | 1 | 172 | 138 | 309 | hypothetical protein OsJ_11574 [Oryza sativa Japonica Group] |
| RefSeq | NP_001143144.1 | 0 | 1 | 172 | 200 | 370 | hypothetical protein LOC100275624 [Zea mays] |
| RefSeq | XP_002464281.1 | 0 | 1 | 172 | 200 | 370 | hypothetical protein SORBIDRAFT_01g015590 [Sorghum bicolor] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| FL969006 | 196 | 1 | 196 | 0 |
| BU986431 | 172 | 1 | 172 | 0 |
| EY254283 | 151 | 22 | 172 | 0 |
| DT511993 | 177 | 1 | 177 | 0 |
| FD542364 | 177 | 1 | 177 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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