Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00046214m |
Family | GH9 |
Protein Properties | Length: 392 Molecular Weight: 42489.3 Isoelectric Point: 9.4395 |
Chromosome | Chromosome/Scaffold: 0133551 Start: 1508 End: 3069 |
Description | glycosyl hydrolase 9B13 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 34 | 381 | 0 |
DYRDALAKSILFFEGQRSGRLPPSQRMSWRRDSGLSDGAAAKVDLVGGYHDAGDNVKFGFPMAFSMTMLAWSVVEFGGLMKAELQHAREAVRWGADYLLK ATAHPDTIYVQVGDATKDHACWERPEDMDTPRTVYKVDAGTPGSDVAAETAAALAAASLVFRKADPAYAGRLLARAKRVFAFADRHRGSYSTGLAADVCP YYCSYSGYQDELLWGAAWLHRATRSPAYLGYIQANGQVLGAGEGDNTFGWDNKHAGARVLIARSLLVQRQGALREYRAHADAFICSMVPGTPADQTQYTR GGLLFKLSDSNMQYVTSSAFLLLTYAKYLAFARQTVSCGGGGGGAVVT |
Full Sequence |
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Protein Sequence Length: 392 Download |
MARLRCLFVL ALLLAHLPGD AVAGRGHHGP AAHDYRDALA KSILFFEGQR SGRLPPSQRM 60 SWRRDSGLSD GAAAKVDLVG GYHDAGDNVK FGFPMAFSMT MLAWSVVEFG GLMKAELQHA 120 REAVRWGADY LLKATAHPDT IYVQVGDATK DHACWERPED MDTPRTVYKV DAGTPGSDVA 180 AETAAALAAA SLVFRKADPA YAGRLLARAK RVFAFADRHR GSYSTGLAAD VCPYYCSYSG 240 YQDELLWGAA WLHRATRSPA YLGYIQANGQ VLGAGEGDNT FGWDNKHAGA RVLIARSLLV 300 QRQGALREYR AHADAFICSM VPGTPADQTQ YTRGGLLFKL SDSNMQYVTS SAFLLLTYAK 360 YLAFARQTVS CGGGGGGAVV TPQRLRAIAR RR |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN02175 | PLN02175 | 2.0e-142 | 28 | 392 | 366 | + endoglucanase |
PLN03009 | PLN03009 | 1.0e-148 | 31 | 392 | 365 | + cellulase |
pfam00759 | Glyco_hydro_9 | 1.0e-151 | 34 | 391 | 364 | + Glycosyl hydrolase family 9. |
PLN02308 | PLN02308 | 2.0e-172 | 31 | 392 | 362 | + endoglucanase |
PLN02266 | PLN02266 | 0 | 20 | 392 | 373 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN25528.1 | 0 | 1 | 392 | 1 | 391 | unknown [Zea mays] |
RefSeq | NP_001042867.1 | 0 | 1 | 392 | 35 | 423 | Os01g0312800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151458.1 | 0 | 1 | 392 | 1 | 391 | endoglucanase 1 [Zea mays] |
Swiss-Prot | Q8LQ92 | 0 | 1 | 392 | 1 | 389 | GUN3_ORYSJ RecName: Full=Endoglucanase 3; AltName: Full=Endo-1,4-beta glucanase 3; AltName: Full=OsGLU8; Flags: Precursor |
RefSeq | XP_002455539.1 | 0 | 1 | 392 | 1 | 391 | hypothetical protein SORBIDRAFT_03g012840 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 32 | 377 | 2 | 343 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
PDB | 1ksc_A | 0 | 32 | 377 | 2 | 343 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
PDB | 1ks8_A | 0 | 32 | 377 | 2 | 343 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 32 | 362 | 3 | 333 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 32 | 362 | 3 | 333 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |