| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00046579m |
| Family | GH35 |
| Protein Properties | Length: 669 Molecular Weight: 75069.6 Isoelectric Point: 6.4208 |
| Chromosome | Chromosome/Scaffold: 013418 Start: 271 End: 7015 |
| Description | beta-galactosidase 17 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 38 | 362 | 0 |
| FMKDGAPFQIVGGDVHYFRIVPEYWKDRLLRAKALGLNTIQTYVPWNLHEPEPQSWEFNGFADLESYLRLAQELGMLVMLRVGPYICGEWDLGGFPPWLL AIEPALKLRSSDSTYLSLVGRWWGVLFPKVAPLLYSNGGPVIMVQIENEFGSFGDDKNYLHYLVQLARRYLGDDIVLYTTDGGAMGNLKNGSISQDDVFA AVDFETGSNPWPIFRLQKKYNLPGKSAPLSSEFYTGWLTHWGESMATTDATSTAKSLKTILCRNGSAVLYMAHGGTNFGFYSGANTGQDESDYKPDLTSY DYDAPIKEHGDVHNSKYKALRRVIH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 669 Download |
| MASGGAFRNL RLAVLCLALT SSVGGEASRR FWIENDTFMK DGAPFQIVGG DVHYFRIVPE 60 YWKDRLLRAK ALGLNTIQTY VPWNLHEPEP QSWEFNGFAD LESYLRLAQE LGMLVMLRVG 120 PYICGEWDLG GFPPWLLAIE PALKLRSSDS TYLSLVGRWW GVLFPKVAPL LYSNGGPVIM 180 VQIENEFGSF GDDKNYLHYL VQLARRYLGD DIVLYTTDGG AMGNLKNGSI SQDDVFAAVD 240 FETGSNPWPI FRLQKKYNLP GKSAPLSSEF YTGWLTHWGE SMATTDATST AKSLKTILCR 300 NGSAVLYMAH GGTNFGFYSG ANTGQDESDY KPDLTSYDYD APIKEHGDVH NSKYKALRRV 360 IHECIGSPLH PLPSDIEKAN YGLVKLQKVT SLFDIIANIS DPLRCAVSEH PLYMEQIGQM 420 FGFLLYMSEY QGKLPSSILS IPKVHDRAQV FLSCSTDSVR NPRYVGVIER WSSKTLEIPN 480 LGCSANTSLY ILVENMGRIN YGAYIFDRKG ILSPIQIDGV TLHHWKMYPL TFNSLDNLPK 540 LQLITQMPDV RASKVSVIHG HSEKKFQESS FYLNEPEFYE GHFHIDSESE MKDTFISFRG 600 WNKGVVFVNN FNIGRFWPAR GPQCALYVPG PILRPGDNVI VIFELHGPNP ELTVNLVTDP 660 DFTCGPKQ* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 2.0e-5 | 60 | 188 | 146 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 1.0e-33 | 36 | 648 | 656 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 4.0e-41 | 47 | 365 | 332 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 8.0e-145 | 37 | 363 | 328 | + Glycosyl hydrolases family 35. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAV59405.1 | 0 | 20 | 665 | 23 | 660 | putative beta-galactosidase [Oryza sativa Japonica Group] |
| GenBank | ACR37865.1 | 0 | 1 | 668 | 1 | 672 | unknown [Zea mays] |
| RefSeq | NP_001056172.1 | 0 | 20 | 665 | 23 | 672 | Os05g0539400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002327549.1 | 0 | 29 | 668 | 1 | 637 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002441448.1 | 0 | 1 | 668 | 1 | 608 | hypothetical protein SORBIDRAFT_09g026870 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0 | 27 | 659 | 5 | 617 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3thd_C | 0 | 27 | 659 | 5 | 617 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3thd_B | 0 | 27 | 659 | 5 | 617 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3thd_A | 0 | 27 | 659 | 5 | 617 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 3thc_D | 0 | 27 | 659 | 5 | 617 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
