Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00046871m |
Family | GH17 |
Protein Properties | Length: 388 Molecular Weight: 40011.1 Isoelectric Point: 8.9403 |
Chromosome | Chromosome/Scaffold: 0138563 Start: 1364 End: 2626 |
Description | beta-1,3-glucanase_putative |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 101 | 336 | 0 |
TIGNEVLTGGNSSALSRVLLPAMQSLHGAVAALGLDKQITVTTAHNLGVLGTSYPPSAGAFRKDLLPYLCPILDYLARTGSPFLVNAYPYFAYSDDPKGV QLDYALLEPGYAGVQDPNSRLHYPNLLVAQVDAVYHAIAAANTAASRVVEVRVSETGWPSAGAANETGATPQNAARYNSNAMRLVAEGRGTPLKPGVPLR AYVFALFNENLKPGLASERYYGLFKPDGTPAYELSF |
Full Sequence |
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Protein Sequence Length: 388 Download |
MAPRRLLRAG WGPQRPCGSR LAAALCAAVA ALALAPAADA TSASLVGINY GRVGSNLPPP 60 QSVLPLLEGL GIGRVRVYDA DPAVLRAFAG PGSSSSSACR TIGNEVLTGG NSSALSRVLL 120 PAMQSLHGAV AALGLDKQIT VTTAHNLGVL GTSYPPSAGA FRKDLLPYLC PILDYLARTG 180 SPFLVNAYPY FAYSDDPKGV QLDYALLEPG YAGVQDPNSR LHYPNLLVAQ VDAVYHAIAA 240 ANTAASRVVE VRVSETGWPS AGAANETGAT PQNAARYNSN AMRLVAEGRG TPLKPGVPLR 300 AYVFALFNEN LKPGLASERY YGLFKPDGTP AYELSFKLPR DNSTFGHGGG GGGFGGSGNA 360 NGSSGYFNGA GNSGYYDISA AAPARDPP |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-7 | 56 | 327 | 278 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-83 | 46 | 336 | 325 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF85320.1 | 0 | 1 | 382 | 1 | 418 | unknown [Zea mays] |
GenBank | ACF88366.1 | 0 | 1 | 382 | 1 | 417 | unknown [Zea mays] |
GenBank | EEC83592.1 | 0 | 38 | 383 | 28 | 406 | hypothetical protein OsI_29271 [Oryza sativa Indica Group] |
GenBank | EEE58688.1 | 0 | 38 | 383 | 28 | 373 | hypothetical protein OsJ_10123 [Oryza sativa Japonica Group] |
RefSeq | NP_001150602.1 | 0 | 1 | 382 | 1 | 418 | LOC100284235 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 46 | 336 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 46 | 336 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 46 | 336 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 46 | 336 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 46 | 336 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |