y
Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00047727m |
Family | CE10 |
Protein Properties | Length: 319 Molecular Weight: 33985.1 Isoelectric Point: 5.0538 |
Chromosome | Chromosome/Scaffold: 0162089 Start: 357 End: 1734 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE10 | 32 | 316 | 0 |
TTPAGFDAATGVDSKDVVIDAATGATARLYLPPPLEGGATTTKLPVLVFFHGGYFIVGSAAEPMYHRYVNSLVARARVVAVSVEYRLAPEHPLPAAYDDS WAALGWAVSRADPWLSDHGDLGRVFLVGVSAGGNIVHNMALAVGASGLPAAEPARVEGVIELHPSFSGEQKTEVEDEVFFQANNNRWKVIFPGATGGADD PRINPTADGAPSLTKLAGQRLLVCTASEDPRAPRARDYCDAVRASGWRGEAEWFESEGEGHGFFVLNPRTSTAAALMDRVVGFLA |
Full Sequence |
---|
Protein Sequence Length: 319 Download |
MDSGSREVAF DCSSFRLYMD GRVDRVPHRM ETTPAGFDAA TGVDSKDVVI DAATGATARL 60 YLPPPLEGGA TTTKLPVLVF FHGGYFIVGS AAEPMYHRYV NSLVARARVV AVSVEYRLAP 120 EHPLPAAYDD SWAALGWAVS RADPWLSDHG DLGRVFLVGV SAGGNIVHNM ALAVGASGLP 180 AAEPARVEGV IELHPSFSGE QKTEVEDEVF FQANNNRWKV IFPGATGGAD DPRINPTADG 240 APSLTKLAGQ RLLVCTASED PRAPRARDYC DAVRASGWRG EAEWFESEGE GHGFFVLNPR 300 TSTAAALMDR VVGFLAGH* 360 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2272 | PnbA | 3.0e-5 | 73 | 179 | 123 | + Carboxylesterase type B [Lipid metabolism] | ||
cd00312 | Esterase_lipase | 2.0e-6 | 60 | 179 | 138 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
pfam00135 | COesterase | 2.0e-7 | 74 | 179 | 120 | + Carboxylesterase family. | ||
COG0657 | Aes | 3.0e-24 | 35 | 318 | 287 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 3.0e-41 | 78 | 295 | 224 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28069.1 | 0 | 1 | 316 | 1 | 313 | unknown [Zea mays] |
GenBank | EAZ09365.1 | 0 | 1 | 318 | 1 | 319 | hypothetical protein OsI_31638 [Oryza sativa Indica Group] |
RefSeq | NP_001146161.1 | 0 | 1 | 315 | 1 | 327 | hypothetical protein LOC100279730 [Zea mays] |
RefSeq | XP_002462487.1 | 0 | 1 | 318 | 1 | 327 | hypothetical protein SORBIDRAFT_02g026550 [Sorghum bicolor] |
RefSeq | XP_002462487.1 | 0 | 14 | 315 | 328 | 631 | hypothetical protein SORBIDRAFT_02g026550 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 3e-35 | 35 | 315 | 62 | 348 | A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant |
PDB | 2zsh_A | 3e-35 | 35 | 315 | 62 | 348 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 6e-34 | 18 | 315 | 47 | 347 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 6e-34 | 18 | 315 | 47 | 347 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 6e-34 | 18 | 315 | 47 | 347 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
FL780299 | 246 | 43 | 288 | 0 |
FL799828 | 223 | 1 | 223 | 0 |
FL921330 | 210 | 5 | 212 | 0 |
FL804644 | 182 | 138 | 319 | 0 |
FL799828 | 16 | 217 | 232 | 6.4 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|