Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00047835m |
Family | GH9 |
Protein Properties | Length: 497 Molecular Weight: 54228.6 Isoelectric Point: 7.3227 |
Chromosome | Chromosome/Scaffold: 016464 Start: 1449 End: 3592 |
Description | glycosyl hydrolase 9A4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 37 | 483 | 0 |
NYHDALTKSIIFLEAQRSGKLPPNNRVKWRGDSGLEDGKLANVDLTGGYYDAGDNVKYGLPLAFTVTTLAWTALAFKPELESAKEMDHVNEALRWGTDYL LKCAARKKKLWVQVGDPNLDHQCWVRPENMKAPRTLYEIDEKTPGTEIAAETAAAFAAASMVFRNDKKYSRALLNKAKLLFLLAKSHQGSYDGECPFYCS YSGYNDELLWAATWLYLATKRQLYADYISHEAISSSVAEFSWDLKFPGAQVLLAEFNLTSGGGAQTFKTQADNFVCAVLPDTAFHQVFITPGGVIHLRDG ANTQYVTSTAFLFIVYSDLLLRTGQSVLCGSQPIRPERLREFARQQMDYLLGANPRGSSYVVGFGANPPTQPHHRGASTPVLPPGYDVNCGLSFGEWFAP DRPNPNELTGAIMGGPDKDDKFVDKRANSSYTEPCTYINSLAIGPLA |
Full Sequence |
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Protein Sequence Length: 497 Download |
MRALKHGTMR AHVALALAAL VLAGDALQPA LAAGGFNYHD ALTKSIIFLE AQRSGKLPPN 60 NRVKWRGDSG LEDGKLANVD LTGGYYDAGD NVKYGLPLAF TVTTLAWTAL AFKPELESAK 120 EMDHVNEALR WGTDYLLKCA ARKKKLWVQV GDPNLDHQCW VRPENMKAPR TLYEIDEKTP 180 GTEIAAETAA AFAAASMVFR NDKKYSRALL NKAKLLFLLA KSHQGSYDGE CPFYCSYSGY 240 NDELLWAATW LYLATKRQLY ADYISHEAIS SSVAEFSWDL KFPGAQVLLA EFNLTSGGGA 300 QTFKTQADNF VCAVLPDTAF HQVFITPGGV IHLRDGANTQ YVTSTAFLFI VYSDLLLRTG 360 QSVLCGSQPI RPERLREFAR QQMDYLLGAN PRGSSYVVGF GANPPTQPHH RGASTPVLPP 420 GYDVNCGLSF GEWFAPDRPN PNELTGAIMG GPDKDDKFVD KRANSSYTEP CTYINSLAIG 480 PLAALAVRGA QLVATH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 2.0e-138 | 30 | 486 | 474 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 5.0e-146 | 37 | 483 | 462 | + Glycosyl hydrolase family 9. | ||
PLN02266 | PLN02266 | 2.0e-146 | 37 | 492 | 469 | + endoglucanase | ||
PLN02613 | PLN02613 | 2.0e-164 | 32 | 485 | 460 | + endoglucanase | ||
PLN02909 | PLN02909 | 0 | 29 | 488 | 464 | + Endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF86783.1 | 0 | 1 | 496 | 1 | 497 | unknown [Zea mays] |
GenBank | EAZ07843.1 | 0 | 23 | 496 | 26 | 501 | hypothetical protein OsI_30101 [Oryza sativa Indica Group] |
RefSeq | NP_001048297.1 | 0 | 23 | 496 | 26 | 501 | Os02g0778600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151937.1 | 0 | 1 | 496 | 1 | 497 | endoglucanase [Zea mays] |
RefSeq | XP_002452914.1 | 0 | 1 | 496 | 1 | 497 | hypothetical protein SORBIDRAFT_04g034920 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 36 | 489 | 3 | 432 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ksc_A | 0 | 36 | 489 | 3 | 432 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ks8_A | 0 | 36 | 489 | 3 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 36 | 485 | 4 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 36 | 485 | 4 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |