Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00047862m |
Family | GH9 |
Protein Properties | Length: 292 Molecular Weight: 32243.3 Isoelectric Point: 7.264 |
Chromosome | Chromosome/Scaffold: 0156629 Start: 696 End: 1794 |
Description | glycosyl hydrolase 9B1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 30 | 290 | 0 |
DYGDALHKCILFFEGQRSGRLPPDQRVRWRRDSGLHDGAAAGVDLTGGYYDAGDNVKFGFPMAFTATLMSWGLIDFGRSFGPNREEARKAVRWATDYLMK ATARPNTVYVQVGDAFRDHACWERPEDMDTPRTVYKVDPSHPGSDVAAETAAALAAASIVFRDSDPGYSKRLLDRAVAVFEFADKHRGPYSSSLHAAVCP CYCDYSGYQDELLWGAAWLHKASRRREYREYIKRNEVVLGASDAINEFGWDNKHAGINVLI |
Full Sequence |
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Protein Sequence Length: 292 Download |
MPAAARSVKE LAAAGVVLAM LLSAAAAQHD YGDALHKCIL FFEGQRSGRL PPDQRVRWRR 60 DSGLHDGAAA GVDLTGGYYD AGDNVKFGFP MAFTATLMSW GLIDFGRSFG PNREEARKAV 120 RWATDYLMKA TARPNTVYVQ VGDAFRDHAC WERPEDMDTP RTVYKVDPSH PGSDVAAETA 180 AALAAASIVF RDSDPGYSKR LLDRAVAVFE FADKHRGPYS SSLHAAVCPC YCDYSGYQDE 240 LLWGAAWLHK ASRRREYREY IKRNEVVLGA SDAINEFGWD NKHAGINVLI SK 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 6.0e-116 | 30 | 292 | 265 | + endoglucanase | ||
PLN03009 | PLN03009 | 3.0e-123 | 28 | 292 | 268 | + cellulase | ||
pfam00759 | Glyco_hydro_9 | 6.0e-125 | 30 | 292 | 267 | + Glycosyl hydrolase family 9. | ||
PLN02266 | PLN02266 | 1.0e-145 | 29 | 292 | 264 | + endoglucanase | ||
PLN02308 | PLN02308 | 0 | 28 | 292 | 265 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG39876.1 | 0 | 28 | 292 | 33 | 297 | endoglucanase 1 precursor [Zea mays] |
GenBank | EAZ24519.1 | 0 | 29 | 292 | 35 | 298 | hypothetical protein OsJ_08281 [Oryza sativa Japonica Group] |
RefSeq | NP_001048033.1 | 0 | 29 | 292 | 35 | 298 | Os02g0733300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001131617.2 | 0 | 28 | 292 | 33 | 297 | hypothetical protein LOC100192969 [Zea mays] |
RefSeq | XP_002454331.1 | 0 | 1 | 292 | 1 | 295 | hypothetical protein SORBIDRAFT_04g028790 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 29 | 292 | 3 | 266 | A Chain A, Golgi Alpha-Mannosidase Ii |
PDB | 1ksc_A | 0 | 29 | 292 | 3 | 266 | A Chain A, Golgi Alpha-Mannosidase Ii |
PDB | 1ks8_A | 0 | 29 | 292 | 3 | 266 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 30 | 292 | 5 | 273 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 30 | 292 | 5 | 273 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |