Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00047960m |
Family | GH3 |
Protein Properties | Length: 420 Molecular Weight: 45937.5 Isoelectric Point: 6.6435 |
Chromosome | Chromosome/Scaffold: 0158048 Start: 304 End: 2696 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 1 | 198 | 0 |
DPDLVRRIGVATALEVRATGIQYTFAPCIAVCRDPRWGRCYESYSEDHTIVQQMTDIILGLQGEIPVNHTKGVPYVAGKDKVAACAKHFVGDGGTHNGIN ENNTIIDEHGLLSVHMPPYYDSIIKGVATIMVSYSSLNGVKMHANHDLVTGYLKSKLHFRGFVISDWLGIDRITSPPGANYTYSVQAGINAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 420 Download |
DPDLVRRIGV ATALEVRATG IQYTFAPCIA VCRDPRWGRC YESYSEDHTI VQQMTDIILG 60 LQGEIPVNHT KGVPYVAGKD KVAACAKHFV GDGGTHNGIN ENNTIIDEHG LLSVHMPPYY 120 DSIIKGVATI MVSYSSLNGV KMHANHDLVT GYLKSKLHFR GFVISDWLGI DRITSPPGAN 180 YTYSVQAGIN AGIDMVMVPY NYTEYIDDLT SLVRKGIVNM SRIDDAVRRI LRVKFTMGLF 240 ENPLADLSFA DQLGKKEHRE LAREAVRKSL VLLKNGNSPN QQFLPLPKKA RRILVAGSHA 300 SNLGYQCGGW SIQWMGATGN ITTGTTILDA IKSTVADSTP VVYSENPDDN FIKHNDFSFA 360 IIVVGEPPYS ETVGDSTDLT ILDPGPDTIR TVCSAVKCVV VIVSGRPVVI EPYVPLTEAL 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-11 | 270 | 391 | 136 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PLN03080 | PLN03080 | 2.0e-28 | 4 | 309 | 328 | + Probable beta-xylosidase; Provisional | ||
PRK15098 | PRK15098 | 7.0e-52 | 1 | 344 | 358 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 2.0e-70 | 1 | 313 | 318 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 8.0e-74 | 1 | 233 | 235 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80947.1 | 0 | 1 | 420 | 127 | 547 | hypothetical protein [Vitis vinifera] |
GenBank | EEC71555.1 | 0 | 1 | 420 | 522 | 929 | hypothetical protein OsI_03907 [Oryza sativa Indica Group] |
GenBank | EEE55456.1 | 0 | 1 | 420 | 120 | 527 | hypothetical protein OsJ_03617 [Oryza sativa Japonica Group] |
RefSeq | NP_001044387.1 | 0 | 1 | 420 | 143 | 562 | Os01g0771900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002456420.1 | 0 | 1 | 420 | 162 | 581 | hypothetical protein SORBIDRAFT_03g035970 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 1 | 420 | 120 | 540 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
PDB | 1iex_A | 0 | 1 | 420 | 120 | 540 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
PDB | 1iew_A | 0 | 1 | 420 | 120 | 540 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
PDB | 1iev_A | 0 | 1 | 420 | 120 | 540 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
PDB | 1ieq_A | 0 | 1 | 420 | 120 | 540 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO784016 | 359 | 1 | 358 | 0 |
DT559348 | 304 | 11 | 314 | 0 |
CF652906 | 293 | 24 | 316 | 0 |
EX268512 | 299 | 11 | 309 | 0 |
CK206839 | 304 | 1 | 304 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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