Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00048073m |
Family | GT77 |
Protein Properties | Length: 290 Molecular Weight: 33331.1 Isoelectric Point: 7.2587 |
Chromosome | Chromosome/Scaffold: 016082 Start: 1238 End: 2395 |
Description | Nucleotide-diphospho-sugar transferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT77 | 54 | 251 | 0 |
LKHLVIVAFDQKAYEQCVKIHPYCFALGTEGVDFSEEKRFLTAGYLEMMWRRLDFLRLVLEKGYSFIFSDADIMWFRNPFPHFYPDVDFQIACDHYVGNA TDLGNIANGGFNYVKSNERSIEFYSFWYSSRLRYPGYHDQDVFNAIKHDPYIVGIGLTIKFLSTKYFGGFCEPSRDLNEVCTMHANCCIGLRSKIHDL |
Full Sequence |
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Protein Sequence Length: 290 Download |
DSEDLKLERV LKKASTVDNT VILTTLNAAW ASPGSVIDLF IDSFHSGVRT SSLLKHLVIV 60 AFDQKAYEQC VKIHPYCFAL GTEGVDFSEE KRFLTAGYLE MMWRRLDFLR LVLEKGYSFI 120 FSDADIMWFR NPFPHFYPDV DFQIACDHYV GNATDLGNIA NGGFNYVKSN ERSIEFYSFW 180 YSSRLRYPGY HDQDVFNAIK HDPYIVGIGL TIKFLSTKYF GGFCEPSRDL NEVCTMHANC 240 CIGLRSKIHD LRIMMEDWKS YLSLPPNLKR LRTSAWRVPQ NCSLSSSHR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 4.0e-78 | 52 | 251 | 209 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAH66858.1 | 0 | 1 | 289 | 74 | 362 | H0307D04.3 [Oryza sativa (indica cultivar-group)] |
GenBank | EAY95314.1 | 0 | 1 | 282 | 74 | 355 | hypothetical protein OsI_17140 [Oryza sativa Indica Group] |
GenBank | EAZ31779.1 | 0 | 1 | 282 | 74 | 355 | hypothetical protein OsJ_15931 [Oryza sativa Japonica Group] |
RefSeq | NP_001053678.1 | 0 | 1 | 289 | 74 | 362 | Os04g0585400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448406.1 | 0 | 1 | 289 | 85 | 373 | hypothetical protein SORBIDRAFT_06g026610 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG818857 | 231 | 36 | 266 | 0 |
HO247154 | 245 | 41 | 285 | 0 |
DV475881 | 250 | 36 | 285 | 0 |
CF273101 | 227 | 1 | 227 | 0 |
CF675148 | 216 | 1 | 216 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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