| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00048097m |
| Family | GH9 |
| Protein Properties | Length: 230 Molecular Weight: 25482 Isoelectric Point: 9.3189 |
| Chromosome | Chromosome/Scaffold: 0165360 Start: 1028 End: 2325 |
| Description | glycosyl hydrolase 9A1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH9 | 111 | 218 | 2.8e-39 |
| DYTVALHKALMFFNAQRSGKLPKHNNVPWRGNSCMKDGLSDPAVRRSLVGGYYDGGDAVKFNFPAAFSMTLLSWSVIEYSAKYEAVGELGHVRDIIKWGA DYFLKTFN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 230 Download |
| MSMYGRDPWG GPLEICHDSA TDDDRSRNLD IDRGALSRTL DETQQSWLLA GPGDQGRRKK 60 KYVDIGCLVV SRKFFVWTLG VLLAAAVFAG VVAGIAKAIP RRHRPPPQPD DYTVALHKAL 120 MFFNAQRSGK LPKHNNVPWR GNSCMKDGLS DPAVRRSLVG GYYDGGDAVK FNFPAAFSMT 180 LLSWSVIEYS AKYEAVGELG HVRDIIKWGA DYFLKTFNST ADSIDRVVAQ |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02340 | PLN02340 | 2.0e-33 | 111 | 215 | 105 | + endoglucanase | ||
| PLN02613 | PLN02613 | 6.0e-35 | 110 | 220 | 111 | + endoglucanase | ||
| PLN02909 | PLN02909 | 6.0e-35 | 111 | 215 | 105 | + Endoglucanase | ||
| PLN02171 | PLN02171 | 3.0e-36 | 111 | 215 | 105 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 3.0e-46 | 111 | 227 | 117 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR36366.1 | 0 | 1 | 230 | 1 | 230 | unknown [Zea mays] |
| GenBank | EEE58992.1 | 0 | 1 | 230 | 1 | 230 | hypothetical protein OsJ_10702 [Oryza sativa Japonica Group] |
| RefSeq | NP_001050004.1 | 0 | 1 | 230 | 1 | 230 | Os03g0329500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147537.1 | 0 | 1 | 230 | 1 | 230 | endo-1,4-beta-glucanase [Zea mays] |
| RefSeq | XP_002465324.1 | 0 | 1 | 230 | 1 | 231 | hypothetical protein SORBIDRAFT_01g036480 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4tf4_B | 1e-24 | 111 | 219 | 5 | 110 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 4tf4_A | 1e-24 | 111 | 219 | 5 | 110 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 3tf4_B | 1e-24 | 111 | 219 | 5 | 110 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 3tf4_A | 1e-24 | 111 | 219 | 5 | 110 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1tf4_B | 1e-24 | 111 | 219 | 5 | 110 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
