Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00048231m |
Family | GT31 |
Protein Properties | Length: 240 Molecular Weight: 25784.3 Isoelectric Point: 9.729 |
Chromosome | Chromosome/Scaffold: 0157173 Start: 1505 End: 2728 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 146 | 240 | 9.3e-25 |
KRRDSLRDTWVPRGEKLRKLEMEKGIVIRFVIGHSGAPGGGALDRALDSEEAETRDFLRLDHAEGYHELSSKTRIYFTTAVATWDADFYVKVDDD |
Full Sequence |
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Protein Sequence Length: 240 Download |
MALTERQPQL EKTKALRARA PLSRKAIAAL CVASFVAGLL LSGRVALMPA DASGDGGAAK 60 EGVRVSGGCG GNKRKLGENH PKDLLNEVSR THQAIESLDK AVSTLEMELA VERARSGGGG 120 GTAVASKPPQ KAFVVIGINT AFTSRKRRDS LRDTWVPRGE KLRKLEMEKG IVIRFVIGHS 180 GAPGGGALDR ALDSEEAETR DFLRLDHAEG YHELSSKTRI YFTTAVATWD ADFYVKVDDD 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01762 | Galactosyl_T | 1.0e-18 | 146 | 240 | 96 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
pfam13334 | DUF4094 | 2.0e-27 | 23 | 114 | 92 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
PLN03193 | PLN03193 | 6.0e-73 | 18 | 240 | 236 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACL53751.1 | 0 | 1 | 240 | 9 | 250 | unknown [Zea mays] |
GenBank | EEC79262.1 | 0 | 1 | 240 | 2 | 244 | hypothetical protein OsI_20042 [Oryza sativa Indica Group] |
RefSeq | NP_001044974.1 | 0 | 1 | 240 | 4 | 246 | Os01g0877400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149873.1 | 0 | 1 | 240 | 9 | 253 | beta-1,3-galactosyltransferase sqv-2 [Zea mays] |
RefSeq | XP_002456730.1 | 0 | 2 | 240 | 682 | 923 | hypothetical protein SORBIDRAFT_03g041540 [Sorghum bicolor] |