y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00048233m |
Family | CE10 |
Protein Properties | Length: 328 Molecular Weight: 34366.8 Isoelectric Point: 5.045 |
Chromosome | Chromosome/Scaffold: 015953 Start: 4784 End: 5995 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 43 | 325 | 0 |
GVTSKDVVVDAATGLAVRLYLPATQTEAPLASEPDGGVATTKLPVLVIFHGGYFVIGSPGCPDFHRYVNSEVAAARVVAVSVDYRLAPEHPLPAAYDDAW AALSWAASGVDPWLSDHGDLGRVFVAGASAGANIAHNVAVAAGARAVAPALVRIEGVILLHPSFCGEQKLEGEAEEFWRANKRRWAVIFPGARDGSDDPR INPMAAGEPGLAKLAGRRLFVSTASVDPLAPRGRAYCEAVRASGWPGKVEWFESRGEGHVFFVSDYGSHEAVALMDRVVAFVA |
Full Sequence |
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Protein Sequence Length: 328 Download |
MAMDSASAEV AFECGCFLLY GDGRVERTSG MDTVPAGYDA GTGVTSKDVV VDAATGLAVR 60 LYLPATQTEA PLASEPDGGV ATTKLPVLVI FHGGYFVIGS PGCPDFHRYV NSEVAAARVV 120 AVSVDYRLAP EHPLPAAYDD AWAALSWAAS GVDPWLSDHG DLGRVFVAGA SAGANIAHNV 180 AVAAGARAVA PALVRIEGVI LLHPSFCGEQ KLEGEAEEFW RANKRRWAVI FPGARDGSDD 240 PRINPMAAGE PGLAKLAGRR LFVSTASVDP LAPRGRAYCE AVRASGWPGK VEWFESRGEG 300 HVFFVSDYGS HEAVALMDRV VAFVAGH* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00135 | COesterase | 0.0008 | 76 | 107 | 32 | + Carboxylesterase family. | ||
COG0657 | Aes | 3.0e-12 | 36 | 327 | 298 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 1.0e-16 | 88 | 304 | 226 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28069.1 | 0 | 3 | 325 | 1 | 313 | unknown [Zea mays] |
RefSeq | NP_001063360.1 | 0 | 3 | 327 | 1 | 319 | Os09g0455900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001146161.1 | 0 | 3 | 320 | 1 | 323 | hypothetical protein LOC100279730 [Zea mays] |
RefSeq | XP_002462487.1 | 0 | 3 | 327 | 1 | 327 | hypothetical protein SORBIDRAFT_02g026550 [Sorghum bicolor] |
RefSeq | XP_002462487.1 | 0 | 10 | 324 | 321 | 631 | hypothetical protein SORBIDRAFT_02g026550 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 1e-32 | 33 | 324 | 59 | 348 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 2zsh_A | 1e-32 | 33 | 324 | 59 | 348 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 2e-32 | 17 | 324 | 32 | 347 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 2e-32 | 17 | 324 | 32 | 347 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 2e-32 | 17 | 324 | 32 | 347 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FE646338 | 214 | 1 | 214 | 0 |
FE646339 | 133 | 196 | 328 | 0 |
CT847751 | 302 | 2 | 300 | 0 |
FL780299 | 254 | 44 | 296 | 0 |
CT847751 | 59 | 270 | 326 | 3.2 |
Sequence Alignments (This image is cropped. Click for full image.) |
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