Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00048329m |
Family | GT77 |
Protein Properties | Length: 290 Molecular Weight: 33411.1 Isoelectric Point: 6.1553 |
Chromosome | Chromosome/Scaffold: 0158472 Start: 1581 End: 2707 |
Description | Nucleotide-diphospho-sugar transferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT77 | 54 | 251 | 0 |
LRHLVIVAFDWKAYKRCVKIHPYCFALTTEDVDFSEEKRFQTSGYLEMMLKRLDFLRLVLEKGYSFVFSDSDIMLFRNPFPFFYSDGDFQIACDHYVGNA TDLRNIANGGFNYVKSNDQSIEFYKFWYSSRFRYPGYHDQDVFNFIKHDPYTTDIGLTIKFLSTSYFGCICEPSRDLNKVCTMHANCCIGLQSKIHDL |
Full Sequence |
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Protein Sequence Length: 290 Download |
DSEDLRLELV LQEASMDNKT VILTTLNAAW ASPGSVIDLF IDSFRSGVGT SSLLRHLVIV 60 AFDWKAYKRC VKIHPYCFAL TTEDVDFSEE KRFQTSGYLE MMLKRLDFLR LVLEKGYSFV 120 FSDSDIMLFR NPFPFFYSDG DFQIACDHYV GNATDLRNIA NGGFNYVKSN DQSIEFYKFW 180 YSSRFRYPGY HDQDVFNFIK HDPYTTDIGL TIKFLSTSYF GCICEPSRDL NKVCTMHANC 240 CIGLQSKIHD LRIMMEDWRN YMSMPPSLKS FGALSWRVPQ NCSLSLLSP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 2.0e-69 | 52 | 251 | 209 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAH66858.1 | 0 | 1 | 285 | 74 | 358 | H0307D04.3 [Oryza sativa (indica cultivar-group)] |
GenBank | EAY95314.1 | 0 | 1 | 282 | 74 | 355 | hypothetical protein OsI_17140 [Oryza sativa Indica Group] |
RefSeq | NP_001047769.1 | 0 | 8 | 288 | 112 | 392 | Os02g0686300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001053678.1 | 0 | 1 | 285 | 74 | 358 | Os04g0585400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002452740.1 | 0 | 1 | 285 | 102 | 386 | hypothetical protein SORBIDRAFT_04g031550 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO247154 | 246 | 41 | 286 | 0 |
JG802125 | 230 | 61 | 290 | 0 |
DV475881 | 251 | 36 | 286 | 0 |
GT833470 | 230 | 57 | 286 | 0 |
CD935787 | 226 | 47 | 272 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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