Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00048403m |
Family | GT31 |
Protein Properties | Length: 502 Molecular Weight: 57179 Isoelectric Point: 9.1653 |
Chromosome | Chromosome/Scaffold: 016222 Start: 5 End: 3839 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 269 | 451 | 0 |
ERMAVRKTWMQIPEIKSSEVVARFFVALNSRKEVNVMLKKEAEYFGDIVILPFIDRYELVVLKTIAICEYGVQNLTAANIMKCDDDTFVRVDVVLRHIKL NNGGKPLYVGNLNLLHRPLRTGKWAVTDEEWPEDIYPPYANGPGYVISGDIAKFIVSQHANQSLRLFKMEDVSMGLWVEKFNS |
Full Sequence |
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Protein Sequence Length: 502 Download |
RCPPPVSQRA RGRVVFLPCG LAAGSSVTVV GTPRAAHREF VPQLARMRQG DGTVMVSQFM 60 VELQGLRAVD GEEPPRILHL NPRLRGDWSQ HPILEHNTCY RMQWGAAQRC DGTPTDDSDD 120 KVDGFPKCEK WIRNDIVGTK ESKTTSWLKR FIGRAKKPAM TWPFPFVEER LFVLTIQAGV 180 EGFHIYVGGR HVTSFPYRPG FTLEEATGLF VKGDVDVHSV YATALPMSHP SFSLQQVLEM 240 SEKWRSRPLP KRPISLFIGI LSASNHFAER MAVRKTWMQI PEIKSSEVVA RFFVALNSRK 300 EVNVMLKKEA EYFGDIVILP FIDRYELVVL KTIAICEYGV QNLTAANIMK CDDDTFVRVD 360 VVLRHIKLNN GGKPLYVGNL NLLHRPLRTG KWAVTDEEWP EDIYPPYANG PGYVISGDIA 420 KFIVSQHANQ SLRLFKMEDV SMGLWVEKFN STKPVQYSHS WRFCQYGCLE NYYTAHYQSP 480 RQMLCLWDKL IRGRASCCNY R* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00908 | Gal-bind_lectin | 9.0e-17 | 18 | 220 | 203 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
cd00070 | GLECT | 6.0e-18 | 14 | 220 | 207 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
pfam00337 | Gal-bind_lectin | 3.0e-22 | 13 | 220 | 208 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
pfam01762 | Galactosyl_T | 2.0e-27 | 268 | 448 | 190 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03133 | PLN03133 | 5.0e-128 | 11 | 501 | 504 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL73538.1 | 0 | 1 | 501 | 142 | 655 | AF466200_17 putative galactosyltransferase family [Sorghum bicolor] |
GenBank | ACN33452.1 | 0 | 1 | 501 | 141 | 641 | unknown [Zea mays] |
GenBank | EEE67993.1 | 0 | 1 | 501 | 141 | 641 | hypothetical protein OsJ_25935 [Oryza sativa Japonica Group] |
RefSeq | NP_001060925.1 | 0 | 1 | 501 | 141 | 634 | Os08g0130900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148052.1 | 0 | 1 | 501 | 139 | 639 | LOC100281660 [Zea mays] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO862085 | 340 | 90 | 428 | 0 |
GT043202 | 286 | 217 | 502 | 0 |
EG385929 | 253 | 54 | 306 | 0 |
JK594490 | 229 | 274 | 502 | 0 |
FF350910 | 301 | 25 | 325 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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