| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00048424m |
| Family | GT8 |
| Protein Properties | Length: 520 Molecular Weight: 59214.5 Isoelectric Point: 6.3905 |
| Chromosome | Chromosome/Scaffold: 015999 Start: 4312 End: 8565 |
| Description | galacturonosyltransferase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT8 | 204 | 491 | 0 |
| CLSMRLTVDYFNASSDMEHSDPDKFGNPAFQHYVIFSTNLLASSMTINSSVINSEESANIVFHFIRNSYKGATIRVLNFEDFQVKNLGNGIVDQLSPSEE FRITSNSNALMLNTLTRTEYISMFGHSLFLLPELFTNLKRVIVLEDDTIVQRELSLLWNLDLKGKVIGAVQFCRVRFGQLRAYFPDLPYNSSSCIWMSGV SIIDLDEWREHDVTGIHHQILEKLRPDTEASWRSAALPAGLLAFQNLIHPIEGQWVQFGLGHDYGLAHGAIKKAAILHYNGNMKPWLE | |||
| Full Sequence |
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| Protein Sequence Length: 520 Download |
| MRAKSKLQCK EWTNTNDSQS DKVIGNISIH PAPPIQQATV LENSSFLNDS FEHGLPGDEN 60 GKSCQLQFGS YCLWSVEHEE VMKDFIVKRL KDQLFVARAY YPSIVKLDGM EKLSHEVKQN 120 IQEHGHMLSE AISDADLPEL HRVNMAKMDQ TITAAKSCDV ECTSVEKKLT QLLDMTEDEA 180 LFHARQSAYL YRLGVQSLPK SLHCLSMRLT VDYFNASSDM EHSDPDKFGN PAFQHYVIFS 240 TNLLASSMTI NSSVINSEES ANIVFHFIRN SYKGATIRVL NFEDFQVKNL GNGIVDQLSP 300 SEEFRITSNS NALMLNTLTR TEYISMFGHS LFLLPELFTN LKRVIVLEDD TIVQRELSLL 360 WNLDLKGKVI GAVQFCRVRF GQLRAYFPDL PYNSSSCIWM SGVSIIDLDE WREHDVTGIH 420 HQILEKLRPD TEASWRSAAL PAGLLAFQNL IHPIEGQWVQ FGLGHDYGLA HGAIKKAAIL 480 HYNGNMKPWL ELGIHRYRKY WKRYLPRDDV FMMDCNVNP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd06429 | GT8_like_1 | 3.0e-80 | 235 | 505 | 285 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
| PLN02718 | PLN02718 | 5.0e-81 | 75 | 517 | 476 | + Probable galacturonosyltransferase | ||
| PLN02910 | PLN02910 | 2.0e-92 | 69 | 518 | 481 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 3.0e-99 | 81 | 519 | 468 | + Probable galacturonosyltransferase | ||
| PLN02769 | PLN02769 | 0 | 10 | 518 | 541 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAT01328.1 | 0 | 11 | 519 | 137 | 667 | putative glycosyltransferase [Oryza sativa Japonica Group] |
| GenBank | EEC79421.1 | 0 | 10 | 519 | 94 | 637 | hypothetical protein OsI_20392 [Oryza sativa Indica Group] |
| GenBank | EEE64154.1 | 0 | 10 | 519 | 94 | 637 | hypothetical protein OsJ_18986 [Oryza sativa Japonica Group] |
| RefSeq | XP_002441280.1 | 0 | 13 | 519 | 101 | 638 | hypothetical protein SORBIDRAFT_09g023760 [Sorghum bicolor] |
| RefSeq | XP_002441763.1 | 0 | 58 | 518 | 177 | 654 | hypothetical protein SORBIDRAFT_08g002010 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ss9_A | 0.007 | 322 | 428 | 77 | 181 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1ga8_A | 0.007 | 322 | 428 | 77 | 181 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1g9r_A | 0.007 | 322 | 428 | 77 | 181 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG872773 | 271 | 10 | 270 | 0 |
| JG904049 | 266 | 10 | 265 | 0 |
| FL762181 | 297 | 32 | 307 | 0 |
| JK588646 | 189 | 332 | 520 | 0 |
| JK588646 | 37 | 306 | 342 | 0.000004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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