| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00048523m |
| Family | CE10 |
| Protein Properties | Length: 248 Molecular Weight: 26441.5 Isoelectric Point: 6.2256 |
| Chromosome | Chromosome/Scaffold: 0159294 Start: 231 End: 1445 |
| Description | alpha/beta-Hydrolases superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE10 | 25 | 200 | 1.2e-39 |
| DGRAERARAACHTAPAGFDAETGVTSKDVVIDAATGVAARLYLPSVRQVAATVKLPVLVFYHGGYFVVGSPSHPLFHRYVNSLAAAARVVAVSVRYRLAP EHPLPAAYDDSWAALTWVASGADPWLTDHGDLGRLFLSGVSAGANIAHNMAGARVILLHPSFAGEQKGEEEDGEFW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 248 Download |
| MDSVGGGGGG AEDVYSCGYF RLYRDGRAER ARAACHTAPA GFDAETGVTS KDVVIDAATG 60 VAARLYLPSV RQVAATVKLP VLVFYHGGYF VVGSPSHPLF HRYVNSLAAA ARVVAVSVRY 120 RLAPEHPLPA AYDDSWAALT WVASGADPWL TDHGDLGRLF LSGVSAGANI AHNMAGARVI 180 LLHPSFAGEQ KGEEEDGEFW RANKDSGWRG ELECFESEGE HGFFVPEHGS REAAKLMDRV 240 AHFLAGH* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| COG2272 | PnbA | 0.008 | 65 | 100 | 36 | + Carboxylesterase type B [Lipid metabolism] |
| cd00312 | Esterase_lipase | 0.006 | 65 | 188 | 139 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| pfam00135 | COesterase | 0.001 | 78 | 101 | 24 | + Carboxylesterase family. |
| COG0657 | Aes | 2.0e-13 | 27 | 171 | 145 | + Esterase/lipase [Lipid metabolism] |
| pfam07859 | Abhydrolase_3 | 7.0e-20 | 82 | 209 | 144 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN28069.1 | 0 | 15 | 208 | 10 | 215 | unknown [Zea mays] |
| GenBank | ACN28069.1 | 0.000005 | 161 | 247 | 231 | 315 | unknown [Zea mays] |
| RefSeq | NP_001146161.1 | 0 | 9 | 204 | 4 | 227 | hypothetical protein LOC100279730 [Zea mays] |
| RefSeq | NP_001146161.1 | 0.0003 | 161 | 240 | 246 | 323 | hypothetical protein LOC100279730 [Zea mays] |
| RefSeq | XP_002462487.1 | 0 | 15 | 205 | 323 | 532 | hypothetical protein SORBIDRAFT_02g026550 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2o7v_A | 1e-26 | 44 | 178 | 49 | 181 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 2o7r_A | 1e-26 | 44 | 178 | 49 | 181 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
| PDB | 2zsi_A | 2e-26 | 47 | 220 | 69 | 263 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
| PDB | 2zsh_A | 2e-26 | 47 | 220 | 69 | 263 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_F | 6e-26 | 39 | 208 | 53 | 252 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
| isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FL846155 | 219 | 1 | 204 | 0 |
| FE623838 | 167 | 1 | 167 | 0 |
| EE153671 | 209 | 15 | 208 | 0 |
| FL799828 | 212 | 12 | 207 | 0 |
| DR813007 | 220 | 11 | 201 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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