y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00048559m |
Family | GH1 |
Protein Properties | Length: 418 Molecular Weight: 47532.6 Isoelectric Point: 7.1061 |
Chromosome | Chromosome/Scaffold: 0160112 Start: 186 End: 2621 |
Description | beta glucosidase 40 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 1 | 415 | 0 |
DDVQLMADMGMDAYRFSIAWSRILPNGTGQVNQAGIDHYNKVIDALVSKGIQPYVTLYHWDLPRALEDRYNGWLNRQIVDDFAAYAETCFKAFGDRVKHW ITINEPHTVAVQGYDAGLHAPGRCSVLLHLYCKSGNSGTEPYIVAHNFILAHATVSDIYRRKYKATQNGQIGIAFDVIWYEPMTNSTIDIEATKRAQEFQ LGWFADPFFFGDYPATMRTRVAERLPKFTADESALVKGALDFMGINHYTTFYARHNTTNIIGRLLNDTLADTGTVSLPFDKNGKPIGDRANSIWLYIVPS GMRKLMNYVKERYNSPPVYITENGMDDGNSPFTSINDALKDNKRIKYHNDYLTSLAASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYRDNLK RYPKNSVQWFKSLLS |
Full Sequence |
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Protein Sequence Length: 418 Download |
DDVQLMADMG MDAYRFSIAW SRILPNGTGQ VNQAGIDHYN KVIDALVSKG IQPYVTLYHW 60 DLPRALEDRY NGWLNRQIVD DFAAYAETCF KAFGDRVKHW ITINEPHTVA VQGYDAGLHA 120 PGRCSVLLHL YCKSGNSGTE PYIVAHNFIL AHATVSDIYR RKYKATQNGQ IGIAFDVIWY 180 EPMTNSTIDI EATKRAQEFQ LGWFADPFFF GDYPATMRTR VAERLPKFTA DESALVKGAL 240 DFMGINHYTT FYARHNTTNI IGRLLNDTLA DTGTVSLPFD KNGKPIGDRA NSIWLYIVPS 300 GMRKLMNYVK ERYNSPPVYI TENGMDDGNS PFTSINDALK DNKRIKYHND YLTSLAASIK 360 EDGCDVRGYF AWSLLDNWEW AAGYTSRFGL YFVDYRDNLK RYPKNSVQWF KSLLSSS* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2723 | BglB | 6.0e-124 | 1 | 416 | 421 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
PLN02814 | PLN02814 | 2.0e-125 | 1 | 417 | 419 | + beta-glucosidase | ||
TIGR03356 | BGL | 2.0e-129 | 1 | 410 | 412 | + beta-galactosidase. | ||
PLN02998 | PLN02998 | 2.0e-130 | 1 | 417 | 421 | + beta-glucosidase | ||
pfam00232 | Glyco_hydro_1 | 2.0e-156 | 1 | 416 | 419 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3GNO | 0 | 1 | 416 | 74 | 488 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase |
GenBank | EEC74750.1 | 0 | 1 | 416 | 107 | 521 | hypothetical protein OsI_10506 [Oryza sativa Indica Group] |
GenBank | EEE58575.1 | 0 | 1 | 416 | 107 | 521 | hypothetical protein OsJ_09895 [Oryza sativa Japonica Group] |
RefSeq | NP_001049358.1 | 0 | 1 | 416 | 107 | 521 | Os03g0212800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002465651.1 | 0 | 1 | 417 | 92 | 508 | hypothetical protein SORBIDRAFT_01g043030 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 1 | 416 | 74 | 488 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 3gnp_A | 0 | 1 | 416 | 74 | 488 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 3gno_A | 0 | 1 | 416 | 74 | 488 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3ptq_B | 0 | 1 | 414 | 92 | 503 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3ptq_A | 0 | 1 | 414 | 92 | 503 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO467354 | 274 | 1 | 274 | 0 |
CD445171 | 246 | 1 | 246 | 0 |
EE190553 | 267 | 118 | 384 | 0 |
CO441173 | 237 | 182 | 418 | 0 |
EH773902 | 283 | 2 | 284 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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