| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00048742m |
| Family | GT43 |
| Protein Properties | Length: 452 Molecular Weight: 51667.8 Isoelectric Point: 9.3746 |
| Chromosome | Chromosome/Scaffold: 016521 Start: 3044 End: 6311 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT43 | 216 | 427 | 0 |
| LAHVLKAVQAPLLWLVVEWPEQSYETAEILRSSGVMYRHLICRKNTTSVRKIAVCQRNNAIYHVKKHHLDGIMHFADEERSYSADVFEEMQKIRRFGSWP VAIHVRTKYRAVLEGPICKGSRVTGWHTIQTVQKKSMTRRFPIGFSAFAFNSTMLWDPQRWNRPAMDSVIVHSGGRGGLQESRFIEKLVKNERQVEGLPD NCNRVMVWNFNL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 452 Download |
| MMSSRRNSGI ILREGSVRDW SEFNDPSPSP KLLYSQSYVA MRGLLASVVS LDFFLLSSKL 60 KSAWAGMTSQ RHIRSQERSK SRGLNCKRVA VHLLLCFMVG IFIGFMPFFS VDVYKKIVSE 120 NERLPFHESV VATEMMDTKV KELETVVVEK EVELIDEPEV GESPPVPAML DDEADFAEST 180 RALPAIEESK ITVKKLLIIV TITSVRPQQA YYLNRLAHVL KAVQAPLLWL VVEWPEQSYE 240 TAEILRSSGV MYRHLICRKN TTSVRKIAVC QRNNAIYHVK KHHLDGIMHF ADEERSYSAD 300 VFEEMQKIRR FGSWPVAIHV RTKYRAVLEG PICKGSRVTG WHTIQTVQKK SMTRRFPIGF 360 SAFAFNSTML WDPQRWNRPA MDSVIVHSGG RGGLQESRFI EKLVKNERQV EGLPDNCNRV 420 MVWNFNLEPP QLNYPTGWAL YKNLEADMPV I* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03360 | Glyco_transf_43 | 1.0e-49 | 216 | 423 | 217 | + Glycosyltransferase family 43. | ||
| PLN02458 | PLN02458 | 2.0e-66 | 75 | 427 | 363 | + transferase, transferring glycosyl groups | ||
| cd00218 | GlcAT-I | 5.0e-95 | 195 | 429 | 241 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACL54619.1 | 0 | 1 | 451 | 1 | 441 | unknown [Zea mays] |
| GenBank | ACN26728.1 | 0 | 1 | 450 | 1 | 450 | unknown [Zea mays] |
| RefSeq | NP_001056301.1 | 0 | 1 | 450 | 1 | 450 | Os05g0559600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001152042.1 | 0 | 1 | 451 | 1 | 441 | LOC100285679 [Zea mays] |
| RefSeq | XP_002440234.1 | 0 | 1 | 451 | 1 | 451 | hypothetical protein SORBIDRAFT_09g028220 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 7e-19 | 199 | 432 | 7 | 238 | A Chain A, Crystal Structure Of The Dipicolinate Synthase Chain B From Bacillus Cereus. Northeast Structural Genomics Consortium Target Bcr215. |
| PDB | 1v84_A | 7e-19 | 199 | 432 | 7 | 238 | A Chain A, Crystal Structure Of The Dipicolinate Synthase Chain B From Bacillus Cereus. Northeast Structural Genomics Consortium Target Bcr215. |
| PDB | 1v83_B | 7e-19 | 199 | 432 | 7 | 238 | A Chain A, Crystal Structure Of The Dipicolinate Synthase Chain B From Bacillus Cereus. Northeast Structural Genomics Consortium Target Bcr215. |
| PDB | 1v83_A | 7e-19 | 199 | 432 | 7 | 238 | A Chain A, Crystal Structure Of The Dipicolinate Synthase Chain B From Bacillus Cereus. Northeast Structural Genomics Consortium Target Bcr215. |
| PDB | 1v82_B | 7e-19 | 199 | 432 | 7 | 238 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
