Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00048747m |
Family | AA1 |
Protein Properties | Length: 405 Molecular Weight: 43558.5 Isoelectric Point: 6.3656 |
Chromosome | Chromosome/Scaffold: 0163216 Start: 363 End: 1967 |
Description | laccase 17 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 1 | 397 | 0 |
EWFNVDPEAIIAQALKTGAGPNISDAFTINGLPGPLYNCSSKDTFKLKVQPGKWYLLRLINAALNEELFFSIANHTLTVVDVDAAYVKPFHTDIVLITPG QTSNVLLRAEPDAGCPAATHLMLARPYSTGQPGTFDNTTVAAVLEYAPPGHIKSLPLLRPPLPGLNDTAFAANYSARLRSLATPEYPANVPRAVDRSFFF TVGLGTNPCPANRTCQGPNGSMFTASMNNVSFDMPTTALLQTHYGNIAGVYTADFPAAPLEPFNYTGAPPNNTHVSNGTKVVALQYNTSVEVVLQGTSIL GAESHPLHLHGFDFFVVGQGFGNYDSSKDPAKFNLVDPVQRNTVGVPAGGWVAIRFFADNPGVWFMHCHLEVHTSWGLKMAWVVNDGPLPEQKLMPP |
Full Sequence |
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Protein Sequence Length: 405 Download |
EWFNVDPEAI IAQALKTGAG PNISDAFTIN GLPGPLYNCS SKDTFKLKVQ PGKWYLLRLI 60 NAALNEELFF SIANHTLTVV DVDAAYVKPF HTDIVLITPG QTSNVLLRAE PDAGCPAATH 120 LMLARPYSTG QPGTFDNTTV AAVLEYAPPG HIKSLPLLRP PLPGLNDTAF AANYSARLRS 180 LATPEYPANV PRAVDRSFFF TVGLGTNPCP ANRTCQGPNG SMFTASMNNV SFDMPTTALL 240 QTHYGNIAGV YTADFPAAPL EPFNYTGAPP NNTHVSNGTK VVALQYNTSV EVVLQGTSIL 300 GAESHPLHLH GFDFFVVGQG FGNYDSSKDP AKFNLVDPVQ RNTVGVPAGG WVAIRFFADN 360 PGVWFMHCHL EVHTSWGLKM AWVVNDGPLP EQKLMPPPAD LPKC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02191 | PLN02191 | 2.0e-32 | 47 | 394 | 355 | + L-ascorbate oxidase | ||
pfam00394 | Cu-oxidase | 1.0e-34 | 1 | 149 | 153 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | ||
PLN02604 | PLN02604 | 3.0e-43 | 28 | 378 | 361 | + oxidoreductase | ||
TIGR03388 | ascorbase | 8.0e-46 | 22 | 378 | 367 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 1 | 404 | 405 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC74953.1 | 0 | 43 | 404 | 166 | 531 | hypothetical protein OsI_10938 [Oryza sativa Indica Group] |
RefSeq | NP_001049699.1 | 0 | 1 | 404 | 171 | 578 | Os03g0273200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001131665.1 | 0 | 1 | 404 | 173 | 576 | hypothetical protein LOC100193025 [Zea mays] |
RefSeq | XP_002465485.1 | 0 | 1 | 404 | 169 | 576 | hypothetical protein SORBIDRAFT_01g039690 [Sorghum bicolor] |
RefSeq | XP_002531824.1 | 0 | 1 | 404 | 174 | 576 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 2e-36 | 22 | 394 | 181 | 536 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 1asq_A | 2e-36 | 22 | 394 | 181 | 536 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 1asp_B | 2e-36 | 22 | 394 | 181 | 536 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 1asp_A | 2e-36 | 22 | 394 | 181 | 536 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 1aso_B | 2e-36 | 22 | 394 | 181 | 536 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL727313 | 275 | 6 | 280 | 0 |
FL761925 | 240 | 166 | 405 | 0 |
HO797675 | 408 | 1 | 405 | 0 |
JG213352 | 296 | 65 | 356 | 0 |
GT819531 | 245 | 1 | 244 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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