| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00048943m |
| Family | GT1 |
| Protein Properties | Length: 173 Molecular Weight: 18651.6 Isoelectric Point: 7.0981 |
| Chromosome | Chromosome/Scaffold: 0164067 Start: 11 End: 2109 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 22 | 142 | 6.4e-33 |
| TLAEPKDFVYLLDNCPHDWLFLQCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGDRVHARGLGPPPIPVDQFGLQKLVDAIKFMLEPAVKEKAVE LAKAMESEDGVTGAVRAFLRH | |||
| Full Sequence |
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| Protein Sequence Length: 173 Download |
| MSKHWKLLDR EVSLTRLGGL GTLAEPKDFV YLLDNCPHDW LFLQCKAVVH HGGAGTTAAG 60 LKAACPTTIV PFFGDQPFWG DRVHARGLGP PPIPVDQFGL QKLVDAIKFM LEPAVKEKAV 120 ELAKAMESED GVTGAVRAFL RHLPSKTEEQ SPPQSSSFLE FLGPVSKCLG CS* 180 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 0.001 | 30 | 111 | 82 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| cd03784 | GT1_Gtf_like | 2.0e-23 | 9 | 142 | 134 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACD03256.1 | 0 | 18 | 172 | 9 | 165 | UDP-glycosyltransferase [Avena strigosa] |
| EMBL | CAD39328.2 | 0 | 18 | 172 | 153 | 307 | OSJNBb0080H08.20 [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC76698.1 | 0 | 18 | 172 | 455 | 609 | hypothetical protein OsI_14701 [Oryza sativa Indica Group] |
| GenBank | EEE60429.1 | 0 | 18 | 172 | 142 | 296 | hypothetical protein OsJ_13634 [Oryza sativa Japonica Group] |
| RefSeq | NP_001052094.1 | 0 | 18 | 172 | 455 | 609 | Os04g0131900 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 0.000000000002 | 19 | 160 | 260 | 398 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| PDB | 3h4i_A | 0.000000000002 | 19 | 160 | 260 | 398 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1iir_A | 0.0000000002 | 10 | 140 | 267 | 395 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 1rrv_B | 0.000000008 | 10 | 131 | 268 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 0.000000008 | 10 | 131 | 268 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG780304 | 156 | 18 | 173 | 0 |
| GD046191 | 156 | 18 | 173 | 0 |
| JG824603 | 156 | 18 | 173 | 0 |
| GD046191 | 18 | 1 | 18 | 3.8 |
| JG780304 | 18 | 1 | 18 | 3.9 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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