Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00048979m |
Family | GT20 |
Protein Properties | Length: 237 Molecular Weight: 26483.9 Isoelectric Point: 6.3452 |
Chromosome | Chromosome/Scaffold: 0163550 Start: 1548 End: 2656 |
Description | UDP-Glycosyltransferase / trehalose-phosphatase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 57 | 231 | 0 |
SSHAPRERVIIVANQLPVRAAHRAGGAGWDFAWDEDSLLLQVKDSLRAHHGRGDVEFVYVGGLRDDVPPAEHDQVAHELLEGFRCVPTFLPADLRSRFYH GFCKQQLWPLFHYMLPLSPELGGRFDRLLWQAYVSVNKIFADKILEVISPDEDFVWVHDYHLMVLPTFLRKRFNR |
Full Sequence |
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Protein Sequence Length: 237 Download |
MVSRSYSNLL ELASGGGGGG EPLPSLGRRR VPRVVTAPGI VPGLDASDDD DDASDRSSHA 60 PRERVIIVAN QLPVRAAHRA GGAGWDFAWD EDSLLLQVKD SLRAHHGRGD VEFVYVGGLR 120 DDVPPAEHDQ VAHELLEGFR CVPTFLPADL RSRFYHGFCK QQLWPLFHYM LPLSPELGGR 180 FDRLLWQAYV SVNKIFADKI LEVISPDEDF VWVHDYHLMV LPTFLRKRFN RSSSASS 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0380 | OtsA | 5.0e-29 | 59 | 231 | 173 | + Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | ||
PRK14501 | PRK14501 | 2.0e-35 | 64 | 229 | 173 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
cd03788 | GT1_TPS | 1.0e-46 | 64 | 231 | 168 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
pfam00982 | Glyco_transf_20 | 2.0e-53 | 63 | 231 | 171 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
PLN02205 | PLN02205 | 4.0e-95 | 1 | 231 | 233 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG52003.1 | 0 | 1 | 231 | 1 | 217 | AC012563_13 putative trehalose-6-phosphate synthase; 46897-44149 [Arabidopsis thaliana] |
GenBank | EEC84539.1 | 0 | 1 | 231 | 1 | 243 | hypothetical protein OsI_31278 [Oryza sativa Indica Group] |
RefSeq | NP_001063104.1 | 0 | 1 | 231 | 1 | 224 | Os09g0397300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002460185.1 | 0 | 1 | 231 | 1 | 222 | hypothetical protein SORBIDRAFT_02g024140 [Sorghum bicolor] |
RefSeq | XP_002527520.1 | 0 | 1 | 231 | 1 | 226 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2wtx_D | 0.0000002 | 154 | 228 | 76 | 144 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_C | 0.0000002 | 154 | 228 | 76 | 144 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_B | 0.0000002 | 154 | 228 | 76 | 144 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_A | 0.0000002 | 154 | 228 | 76 | 144 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 1uqu_B | 0.0000002 | 154 | 228 | 76 | 144 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL871186 | 230 | 1 | 230 | 0 |
EB668000 | 230 | 1 | 225 | 0 |
FY786823 | 207 | 29 | 231 | 0 |
FY786950 | 207 | 29 | 231 | 0 |
JZ018779 | 204 | 29 | 231 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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