y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00049329m |
Family | GH9 |
Protein Properties | Length: 194 Molecular Weight: 20958.8 Isoelectric Point: 10.0004 |
Chromosome | Chromosome/Scaffold: 071662 Start: 146 End: 1051 |
Description | glycosyl hydrolase 9A1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 7 | 153 | 1.96182e-44 |
GKGQPLQYVVANSFLASLYADYMEAANVPGWYCGPNFMSTNDLRAFAKSQLNYILGDNPRKMSYVVGFGKKYPRHLHHRGASTPHNGVKYSCTGGYKWRD SKKADPNLLTGAMVGGPDRNDRFKDSRNTYGQNEPTLVGNAGLVAAL |
Full Sequence |
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Protein Sequence Length: 194 Download |
MALFNHGKGQ PLQYVVANSF LASLYADYME AANVPGWYCG PNFMSTNDLR AFAKSQLNYI 60 LGDNPRKMSY VVGFGKKYPR HLHHRGASTP HNGVKYSCTG GYKWRDSKKA DPNLLTGAMV 120 GGPDRNDRFK DSRNTYGQNE PTLVGNAGLV AALVAITDSG RGVGVTAVDK NTMFSAVPPM 180 FPTAPPPPSS WKP* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02266 | PLN02266 | 2.0e-37 | 12 | 141 | 133 | + endoglucanase | ||
PLN02171 | PLN02171 | 1.0e-37 | 12 | 142 | 135 | + endoglucanase | ||
PLN02613 | PLN02613 | 3.0e-39 | 12 | 142 | 135 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 1.0e-40 | 11 | 142 | 132 | + Glycosyl hydrolase family 9. | ||
PLN02345 | PLN02345 | 9.0e-51 | 12 | 142 | 131 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF87544.1 | 0 | 1 | 193 | 258 | 450 | unknown [Zea mays] |
GenBank | ACG29946.1 | 0 | 1 | 193 | 431 | 623 | glycoside transferase, six-hairpin, subgroup [Zea mays] |
RefSeq | NP_001053204.1 | 0 | 1 | 193 | 431 | 623 | Os04g0497200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147970.1 | 0 | 1 | 193 | 431 | 623 | glycoside transferase, six-hairpin, subgroup [Zea mays] |
RefSeq | XP_002446733.1 | 0 | 1 | 177 | 438 | 614 | hypothetical protein SORBIDRAFT_06g021440 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ia7_A | 1e-20 | 38 | 153 | 320 | 423 | A Chain A, Peanut Peroxidase |
PDB | 1ia6_A | 1e-20 | 38 | 153 | 320 | 423 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
PDB | 1ksd_A | 0.000000000000001 | 44 | 160 | 322 | 432 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
PDB | 1ksc_A | 0.000000000000001 | 44 | 160 | 322 | 432 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
PDB | 1ks8_A | 0.000000000000001 | 44 | 160 | 322 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL923585 | 177 | 1 | 177 | 0 |
FL855449 | 177 | 1 | 177 | 0 |
FL924000 | 171 | 7 | 177 | 0 |
FL721106 | 170 | 8 | 177 | 0 |
CF635711 | 177 | 1 | 177 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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