| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00049991m |
| Family | GH1 |
| Protein Properties | Length: 284 Molecular Weight: 30713.3 Isoelectric Point: 4.6404 |
| Chromosome | Chromosome/Scaffold: 072884 Start: 898 End: 4379 |
| Description | beta glucosidase 11 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH1 | 45 | 264 | 0 |
| RDDFPGGFVFGAGTSAYQWEGAAAEDGRAPSIWDTFAHTAGHHTGDGDVAANGYHKYKEDAKLMETGLDAFRFSISWPRLIPNGRGEVNPKGLEYYNNLI NELLDHGIEPHATLFQYDLPQVLEDEYNGWLSPQIIDDFTAYSDVCFREFGDRVTNWTTLNEPNAAALLGYDVGSALPGSCSEPFGNCPNGNSVTEPYIV GHHSLLAHSSAVSLYRKKYQ | |||
| Full Sequence |
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| Protein Sequence Length: 284 Download |
| MARLLLLLLP RVAMLLVAAA SAAAVEAVGS AAPVGSGELG GGLSRDDFPG GFVFGAGTSA 60 YQWEGAAAED GRAPSIWDTF AHTAGHHTGD GDVAANGYHK YKEDAKLMET GLDAFRFSIS 120 WPRLIPNGRG EVNPKGLEYY NNLINELLDH GIEPHATLFQ YDLPQVLEDE YNGWLSPQII 180 DDFTAYSDVC FREFGDRVTN WTTLNEPNAA ALLGYDVGSA LPGSCSEPFG NCPNGNSVTE 240 PYIVGHHSLL AHSSAVSLYR KKYQVLFPLN NIFNYFYALK FLN* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03356 | BGL | 2.0e-69 | 49 | 223 | 180 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 2.0e-74 | 44 | 264 | 224 | + Glycosyl hydrolase family 1. | ||
| PLN02998 | PLN02998 | 8.0e-87 | 44 | 267 | 226 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 7.0e-90 | 43 | 264 | 224 | + beta-glucosidase | ||
| PLN02849 | PLN02849 | 4.0e-94 | 44 | 264 | 222 | + beta-glucosidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002267595.1 | 0 | 43 | 278 | 27 | 261 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002268147.1 | 0 | 43 | 278 | 40 | 281 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002268258.1 | 0 | 43 | 268 | 40 | 268 | PREDICTED: hypothetical protein isoform 3 [Vitis vinifera] |
| RefSeq | XP_002523072.1 | 0 | 44 | 264 | 24 | 246 | beta-glucosidase, putative [Ricinus communis] |
| RefSeq | XP_002523075.1 | 0 | 44 | 264 | 25 | 247 | beta-glucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gnr_A | 0 | 38 | 264 | 7 | 237 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3gnp_A | 0 | 38 | 264 | 7 | 237 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3gno_A | 0 | 38 | 264 | 7 | 237 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 3scv_B | 0 | 41 | 264 | 13 | 236 | A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT COMPLEXED WITH Cellotetraose |
| PDB | 3scv_A | 0 | 41 | 264 | 13 | 236 | A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT COMPLEXED WITH Cellotetraose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Signal Peptide | |||||
|---|---|---|---|---|---|
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| Cleavage Site | |||||
| 24 | |||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| GT809443 | 186 | 41 | 222 | 0 |
| CF451906 | 225 | 43 | 266 | 0 |
| DT730082 | 226 | 43 | 264 | 0 |
| DT741561 | 225 | 43 | 264 | 0 |
| EL688357 | 226 | 44 | 266 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Panicum virgatum | Pavirv00048441m | ||||
| Picea abies | MA_48480g0010 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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