Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00050016m |
Family | GT8 |
Protein Properties | Length: 702 Molecular Weight: 78867.4 Isoelectric Point: 9.8619 |
Chromosome | Chromosome/Scaffold: 067247 Start: 610 End: 4524 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 363 | 673 | 0 |
CLTLRLTNEYYFTNSKNKDFPYVEKLEDPKLYHYALFSDNVLAAAVVVNSTLVHAKKPEDYVFHIVTDRLNYAAMKMWFLANPLGKAAIQVQNIEEFKWL NSSYSPVLKQLESQFMIDYYFKSGHARPDENPKFRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDTVVRRDLTALWLVDLKGKVNGAVETCRETFHRFD KYLNFSNPLIAKNFDPHACGWAYGMNMFDLSEWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNERDIRRAAVI HYNGNLKPWLE |
Full Sequence |
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Protein Sequence Length: 702 Download |
MAVLRGRRRC RGAVLLLLLA SVLAPLVLYG GSPVSVAHLP DSTAASGAFD REDAPNLVWP 60 QIAASGVSLA RDLTIERLGE HKNRVLSATD HLQAVEAASR SRASGKPDAS VLREEPESRN 120 AVVEGNGNAG LGQGGVIREV VGSEGSAGRF GEPGDGKDAV ARNGKEVGIK LPHSIDAEHK 180 DGSDEGGESI ISGMHTTGSL SSSSSQTRDA TTTRDNQTRL SNSSSAHRTT NRRTGQLTTS 240 PDATVHINII KDQLTRAKTY LGFFASRGNH GFARELRARM RDIQRALGDA TSDWQLPQNV 300 HSKIRAMEQT LVKVKKIHDS CSGAVNRRHT VLHSTEQQLE SNKRQANYLA QVAAKSLPKG 360 LHCLTLRLTN EYYFTNSKNK DFPYVEKLED PKLYHYALFS DNVLAAAVVV NSTLVHAKKP 420 EDYVFHIVTD RLNYAAMKMW FLANPLGKAA IQVQNIEEFK WLNSSYSPVL KQLESQFMID 480 YYFKSGHARP DENPKFRNPK YLSILNHLRF YLPEIFPKLN KVLFLDDDTV VRRDLTALWL 540 VDLKGKVNGA VETCRETFHR FDKYLNFSNP LIAKNFDPHA CGWAYGMNMF DLSEWRKQNI 600 TEVYHTWQKL NENRLLWKLG TLPAGLVTFW NRTFPLDRSW HQLGLGYNPN VNERDIRRAA 660 VIHYNGNLKP WLEIGLPKYR KYWSTHVNFN QVFLRECNIN P* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02523 | PLN02523 | 9.0e-178 | 295 | 701 | 412 | + galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 230 | 701 | 472 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 215 | 700 | 499 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 252 | 699 | 454 | + Probable galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 215 | 699 | 488 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ19325.1 | 0 | 8 | 701 | 8 | 697 | glycosyl transferase-like protein [Triticum aestivum] |
EMBL | CAJ26362.1 | 0 | 39 | 701 | 38 | 689 | glycosyl transferase-like protein [Brachypodium sylvaticum] |
GenBank | EAZ09508.1 | 0 | 1 | 701 | 2 | 679 | hypothetical protein OsI_31783 [Oryza sativa Indica Group] |
RefSeq | NP_001063487.1 | 0 | 1 | 701 | 2 | 707 | Os09g0480400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002460421.1 | 0 | 35 | 701 | 34 | 705 | hypothetical protein SORBIDRAFT_02g027840 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.0001 | 498 | 671 | 75 | 252 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1g9r_A | 0.0001 | 498 | 671 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.0002 | 498 | 671 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |