| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00050058m |
| Family | AA1 |
| Protein Properties | Length: 451 Molecular Weight: 49979.9 Isoelectric Point: 5.8312 |
| Chromosome | Chromosome/Scaffold: 073292 Start: 2040 End: 3975 |
| Description | laccase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 5 | 423 | 0 |
| WWKMDLALLEKHFEKEIVDDLPVGATINGKLGDLYNCSGAVEDGYVLDVEPGKTYLLRIINAVLFSEYYLKVAGHKFTVVAADAHYVNPYTTDVIAVAPG ETVDALMVADEPHGRYYMVALPNQAPLPDPQIPVFVTRGIVRYNHHGEEGDPSNDAPMVPEMPDQHDTITSFYFHGNLTSLHRPDRRTKVPAQADEHMFI TLGLGSFCPHGRSCKERWIGNSMGAATMNNVSFQLPTHLAVPLLEAEYYHCNSTTSSSDDGIKFYTLPDNPPELYDFTNPALTPDAAAAALLQRTIRAAA IRRFRYGTVVDIVFQSTSLLQTDSNPMHLHGHDMFVLAQGRGNYNASRDVSRYNLVDPPMKNTVLVPRIGWVAIRFVADNPGVWFMHCHFEFHMMMGMAA VFIVEDGPTVDSVLPPPPL | |||
| Full Sequence |
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| Protein Sequence Length: 451 Download |
| MAGDWWKMDL ALLEKHFEKE IVDDLPVGAT INGKLGDLYN CSGAVEDGYV LDVEPGKTYL 60 LRIINAVLFS EYYLKVAGHK FTVVAADAHY VNPYTTDVIA VAPGETVDAL MVADEPHGRY 120 YMVALPNQAP LPDPQIPVFV TRGIVRYNHH GEEGDPSNDA PMVPEMPDQH DTITSFYFHG 180 NLTSLHRPDR RTKVPAQADE HMFITLGLGS FCPHGRSCKE RWIGNSMGAA TMNNVSFQLP 240 THLAVPLLEA EYYHCNSTTS SSDDGIKFYT LPDNPPELYD FTNPALTPDA AAAALLQRTI 300 RAAAIRRFRY GTVVDIVFQS TSLLQTDSNP MHLHGHDMFV LAQGRGNYNA SRDVSRYNLV 360 DPPMKNTVLV PRIGWVAIRF VADNPGVWFM HCHFEFHMMM GMAAVFIVED GPTVDSVLPP 420 PPLNHPKCGH VNSLKSNELY LMDNKVVSPA * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00394 | Cu-oxidase | 3.0e-31 | 3 | 149 | 152 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | ||
| PLN02191 | PLN02191 | 3.0e-31 | 50 | 388 | 350 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-37 | 29 | 388 | 368 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 2.0e-39 | 49 | 388 | 355 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 8.0e-103 | 1 | 428 | 432 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001064399.1 | 0 | 1 | 422 | 178 | 596 | Os10g0346300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130676.1 | 0 | 1 | 411 | 166 | 578 | hypothetical protein LOC100191779 [Zea mays] |
| RefSeq | NP_001146681.1 | 0 | 1 | 411 | 178 | 585 | hypothetical protein LOC100280281 [Zea mays] |
| RefSeq | XP_002449982.1 | 0 | 1 | 411 | 170 | 581 | hypothetical protein SORBIDRAFT_05g026630 [Sorghum bicolor] |
| RefSeq | XP_002457562.1 | 0 | 4 | 430 | 170 | 595 | hypothetical protein SORBIDRAFT_03g009410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 2e-38 | 49 | 406 | 204 | 521 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asq_A | 2e-38 | 49 | 406 | 204 | 521 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asp_B | 2e-38 | 49 | 406 | 204 | 521 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asp_A | 2e-38 | 49 | 406 | 204 | 521 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1aso_B | 2e-38 | 49 | 406 | 204 | 521 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FL915596 | 227 | 47 | 272 | 0 |
| FL767136 | 205 | 247 | 451 | 0 |
| DT640439 | 260 | 3 | 253 | 0 |
| DV532530 | 260 | 3 | 253 | 0 |
| EG390413 | 240 | 3 | 241 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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