y
Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00050380m |
Family | GT37 |
Protein Properties | Length: 577 Molecular Weight: 63874.3 Isoelectric Point: 9.5059 |
Chromosome | Chromosome/Scaffold: 071888 Start: 569 End: 3060 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT37 | 90 | 544 | 0 |
RAARYDRLYGGLLVDGFDEESCHSRYQSAAYRRNPGRRPSPYLISKLRRHEALQRRCGPGTAAYSAALEQLRSGRSAASPPECAYVVSISYRGIGNRILA AASAFLYAVLTGRALLVDPGNEMDDLFCEPFPNTTWLLPPAGFPLPDYANFSVATAASYGNMVRNKVVVRSDGDAPTAAAQPLPAFAYVHLNYDATVEDN SFFCGGDQRLLRRIQWLVMRTDSYIVPGLFLVPEFREELAALFPERDAVFHHLGRYLFHPNNHVWGLVTRYYDAYLAAARRRVGIQVRVFGGMPDSPELL EQITACTRREGLLPPVLAAGEPISPASRARSSTAVLVTSLKSWYYEELKSMYWEHATAAGGEVVSVHQPSHEEYQRSGARSHDRRAWAEIYLLSLTDVLV TSGRSTFGYVAQGLAGVRPWVLYKPANSSAVPDPPCGRDVSMEPCFHKPPGHDCR |
Full Sequence |
---|
Protein Sequence Length: 577 Download |
MAGDSMASTH RNPSTIVVVQ KPRSPFPTPE LAARAVHGGE EGSRGARRRQ ARELAGGYRR 60 ARRRRAGRAR PQRAQRWGAG SNDLPFLHPR AARYDRLYGG LLVDGFDEES CHSRYQSAAY 120 RRNPGRRPSP YLISKLRRHE ALQRRCGPGT AAYSAALEQL RSGRSAASPP ECAYVVSISY 180 RGIGNRILAA ASAFLYAVLT GRALLVDPGN EMDDLFCEPF PNTTWLLPPA GFPLPDYANF 240 SVATAASYGN MVRNKVVVRS DGDAPTAAAQ PLPAFAYVHL NYDATVEDNS FFCGGDQRLL 300 RRIQWLVMRT DSYIVPGLFL VPEFREELAA LFPERDAVFH HLGRYLFHPN NHVWGLVTRY 360 YDAYLAAARR RVGIQVRVFG GMPDSPELLE QITACTRREG LLPPVLAAGE PISPASRARS 420 STAVLVTSLK SWYYEELKSM YWEHATAAGG EVVSVHQPSH EEYQRSGARS HDRRAWAEIY 480 LLSLTDVLVT SGRSTFGYVA QGLAGVRPWV LYKPANSSAV PDPPCGRDVS MEPCFHKPPG 540 HDCRIKPQWA DPSKDVPYIQ HCDDASWGLK LVGQNT* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd11548 | NodZ_like | 4.0e-5 | 182 | 222 | 46 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
pfam03254 | XG_FTase | 0 | 81 | 544 | 465 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD35723.1 | 0 | 76 | 572 | 87 | 587 | putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa Japonica Group] |
GenBank | EEC80216.1 | 0 | 110 | 572 | 122 | 590 | hypothetical protein OsI_22131 [Oryza sativa Indica Group] |
RefSeq | NP_001057123.1 | 0 | 110 | 572 | 120 | 588 | Os06g0212300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001132645.1 | 0 | 120 | 575 | 2 | 465 | hypothetical protein LOC100194120 [Zea mays] |
RefSeq | XP_002438038.1 | 0 | 80 | 575 | 55 | 552 | hypothetical protein SORBIDRAFT_10g007120 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
DT940872 | 277 | 81 | 351 | 0 |
DT940871 | 249 | 335 | 577 | 0 |
FL739391 | 180 | 81 | 260 | 0 |
GT043638 | 316 | 182 | 496 | 0 |
CV288405 | 317 | 229 | 544 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|