Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00050446m |
Family | AA1 |
Protein Properties | Length: 538 Molecular Weight: 58619.5 Isoelectric Point: 9.0769 |
Chromosome | Chromosome/Scaffold: 068961 Start: 1170 End: 3153 |
Description | SKU5 similar 17 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 43 | 495 | 0 |
TQQGILINGQFPGPRIDCVTNDNLLVTVVNNLDEPFLLTWNGIKQRKNSWQDGVAGTNCPIPPAANYTYKFQAKDQIGTFTYFPSLALHRAAGGFGALNV YQRPRIPVPYPPPAGDFTLLVGDWYRAGHRQLRQSLDAGAPLPPPDGLLINGARSPPAFVGARGGTYLFRVSNVGLRASVNVRIQGHRLRLVEVEGTHPV QNAYDSLDVHAGQSLAFLVALDQPPLDYAVVVSTRFAPANLTAVATLHYAGATARAPGPLPPGPPGQYDWSVNQARSFRWNLTASAARPNPQGSFHYGAI PTSRTLVLASSSPALAGRRRCAVNGVSFVVPDTPLKLADNYNIANVIEWDSLPARPAGGAPPRAGTPVVRLNLHEFVEVVFQNTENELQSWHLDGYDFWV VGYGDGQWTEMQRRTYNLVDAQARHTVQVYPNGWSAILVSLDNKGMWNLRSAI |
Full Sequence |
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Protein Sequence Length: 538 Download |
MPAMAALLVL LLAVAAPLAG ADDPYRYFTW TVTYGPISPL GTTQQGILIN GQFPGPRIDC 60 VTNDNLLVTV VNNLDEPFLL TWNGIKQRKN SWQDGVAGTN CPIPPAANYT YKFQAKDQIG 120 TFTYFPSLAL HRAAGGFGAL NVYQRPRIPV PYPPPAGDFT LLVGDWYRAG HRQLRQSLDA 180 GAPLPPPDGL LINGARSPPA FVGARGGTYL FRVSNVGLRA SVNVRIQGHR LRLVEVEGTH 240 PVQNAYDSLD VHAGQSLAFL VALDQPPLDY AVVVSTRFAP ANLTAVATLH YAGATARAPG 300 PLPPGPPGQY DWSVNQARSF RWNLTASAAR PNPQGSFHYG AIPTSRTLVL ASSSPALAGR 360 RRCAVNGVSF VVPDTPLKLA DNYNIANVIE WDSLPARPAG GAPPRAGTPV VRLNLHEFVE 420 VVFQNTENEL QSWHLDGYDF WVVGYGDGQW TEMQRRTYNL VDAQARHTVQ VYPNGWSAIL 480 VSLDNKGMWN LRSAIWDRQY LGQQLYLRVW TPQQSFSNEY SIPTNAILCG RAAGLPH* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02168 | PLN02168 | 3.0e-153 | 24 | 531 | 521 | + copper ion binding / pectinesterase | ||
PLN02835 | PLN02835 | 0 | 21 | 534 | 514 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 21 | 536 | 524 | + copper ion binding / oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 21 | 533 | 516 | + oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 21 | 534 | 514 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN27681.1 | 0 | 22 | 537 | 24 | 547 | unknown [Zea mays] |
GenBank | ACR38095.1 | 0 | 22 | 537 | 24 | 553 | unknown [Zea mays] |
RefSeq | NP_001058771.1 | 0 | 22 | 537 | 26 | 545 | Os07g0119400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002270831.1 | 0 | 3 | 534 | 6 | 533 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002522337.1 | 0 | 21 | 534 | 25 | 536 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 26 | 533 | 4 | 542 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1asq_A | 0 | 26 | 533 | 4 | 542 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1asp_B | 0 | 26 | 533 | 4 | 542 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1asp_A | 0 | 26 | 533 | 4 | 542 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1aso_B | 0 | 26 | 533 | 4 | 542 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |