Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00050538m |
Family | GT77 |
Protein Properties | Length: 374 Molecular Weight: 41367.8 Isoelectric Point: 6.665 |
Chromosome | Chromosome/Scaffold: 068634 Start: 1952 End: 3612 |
Description | |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT77 | 224 | 329 | 1.2e-27 |
DDVFRGDAGSLDNLPNTGFYHVRATDRAVEMLRRWRAARARFPPNQEQAIFNEIKGELAGELGVRIRFLDTARFGGFCQIFHSDMGAACTMHANCCFGLG NKLHDL |
Full Sequence |
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Protein Sequence Length: 374 Download |
MGLGLGGRDK EACHCQHVVS FLIGAALPTA LLVLLASDRL LEQLGEYSDP AAGPGWQPDA 60 GSSDGQQYSS NSSRRCCSNC YPRSAGTTAI DHRLHYSEFA GLAELLPKVA TDDGTVIITS 120 VNEAFARPNS LLDLFRESFR AGEGIEHLLS HVLVVAVDDM AFAHCAAVHP HCYLLEVHSN 180 LNLSSANEFM SEAYVELVWT KLSLQQRVLE LGYSFLFTRV RGHDDVFRGD AGSLDNLPNT 240 GFYHVRATDR AVEMLRRWRA ARARFPPNQE QAIFNEIKGE LAGELGVRIR FLDTARFGGF 300 CQIFHSDMGA ACTMHANCCF GLGNKLHDLR EVLGQWRNYT GLTPEEKKTR KFMWKNPTKC 360 GTPDKMDWPS TNP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 1.0e-49 | 147 | 329 | 210 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY77007.1 | 0 | 97 | 365 | 73 | 367 | hypothetical protein OsI_04964 [Oryza sativa Indica Group] |
GenBank | EEC72055.1 | 0 | 14 | 360 | 17 | 378 | hypothetical protein OsI_04965 [Oryza sativa Indica Group] |
RefSeq | NP_001045222.1 | 0 | 97 | 365 | 73 | 367 | Os01g0920700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002456849.1 | 0 | 90 | 367 | 5 | 299 | hypothetical protein SORBIDRAFT_03g044030 [Sorghum bicolor] |
RefSeq | XP_002456853.1 | 0 | 1 | 368 | 1 | 375 | hypothetical protein SORBIDRAFT_03g044070 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL719003 | 193 | 200 | 374 | 0 |
FL719002 | 177 | 97 | 255 | 0 |
CT845264 | 283 | 97 | 360 | 0 |
EG394281 | 245 | 98 | 323 | 0 |
CO444543 | 269 | 97 | 346 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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